Quantifying and classifying ichthyoplankton is one of the most effective ways of monitoring the recruitment process in fishes. However, correctly identifying the fish based on morphological characters is extremely difficult, especially in the early stages of development. We examined ichthyoplankton from tributaries and reservoirs along the middle stretch of the Paranapanema River, one of the areas most impacted by hydroelectric projects in the Neotropics. Matching DNA sequences of the COI gene (628-648 bp) allowed us to identify 99.25% of 536 samples of eggs (293) and larvae (243) subjected to BOLD-IDS similarity analysis with a species-level threshold of 1.3%. The results revealed 37 species in 27 genera, 15 families and four orders, some 23.8% of documented fish species in the Paranapanema River. Molecular identification meant that we could include data from egg samples that accounted for about 30% of the species richness observed. The results in this study confirm the efficacy of DNA barcoding in identifying Neotropical ichthyoplankton and show how the data produced provide valuable information for preparing plans for conserving and managing inland waters.
Color patterns of the body are commonly used to distinguish and identify species of Trichomycterus. Therefore, variation in color pattern in a population can cause doubt concerning species identification. With the purpose to test the hypothesis of high variation in color pattern of Trichomycterus davisi (Haseman, 1911), 118 specimens were collected in a stream of a private Ecological Park in southern Brazil, of which 88 were used in the morphological analysis and 30 for DNA barcoding analysis. Three phenotypic classes were determined analyzing the distribution, size and shape of dark brown spots and blotches. The results of morphometric analysis indicate a tendency of association of those pigmentation patterns with the standard length, evidencing ontogenetic variation of color pattern in the species. The results of K2P intraspecific genetic distance (<0.72%), haplotypes network and Bayesian phylogenetic tree corroborate the existence of only one species with a high variable color pattern.
The mapping of repetitive DNA sites by fluorescence in situ hybridization has been widely used for karyotype studies in different species of fish, especially when dealing with related species or even genera presenting high chromosome variability. This study analyzed three populations of Bryconamericus, with diploid number preserved, but with different karyotype formulae. Bryconamericus ecai, from the Forquetinha river/RS, presented three new cytotypes, increasing the number of karyotype forms to seven in this population. Other two populations of Bryconamericus sp. from the Vermelho stream/PR and Cambuta river/PR exhibited interpopulation variation. The chromosome mapping of rDNA sites revealed unique markings among the three populations, showing inter- and intrapopulation variability located in the terminal region. The molecular analysis using DNA barcoding complementing the cytogenetic analysis also showed differentiation among the three populations. The U2 small nuclear DNA repetitive sequence exhibited conserved features, being located in the interstitial region of a single chromosome pair. This is the first report on its occurrence in the genus Bryconamericus. Data obtained revealed a karyotype variability already assigned to the genus, along with polymorphism of ribosomal sites, demonstrating that this group of fish can be undergoing a divergent evolutionary process, constituting a substantive model for studies of chromosomal evolution.
ContextMultiscale approaches are essential for understanding ecological processes and detecting the scale of effect. However, nested multiscale approaches retain the effect of the landscape attributes from the smaller spatial scales into the larger ones. Thus, decoupling local vs. regional scales can reveal detailed ecological responses to landscape context, but this multiscale approach is poorly explored.
ObjectivesWe evaluated the scale of effect of the forest cover (%) and landscape heterogeneity on Euglossini bees combining coupled and decoupled multiscale approaches.
MethodsThe Euglossini males were sampled in forest patches from 15 landscapes within the Atlantic Forest biodiversity hotspot, southeast Brazil. For simplicity, we defined that the coupled approaches represented the local scales and decoupled approaches the regional scales. We 1 decoupled the scales by cutting out the smaller scales inserted into larger ones. We estimated the relationship of the bee community attributes with forest cover (%) and landscape heterogeneity in local and regional scales using Generalized Linear Models.
ResultsWe found positive effects of landscape heterogeneity on species richness for regional scales.Forest cover (%) and landscape heterogeneity in local scales showed positive effects on the euglossine abundances. The scale of effect for euglossine richness was higher than species abundances.
ConclusionsCombining coupled and decoupled multiscale approaches showed adequate capture of the scale of effect of the landscape composition on bee communities. Therefore, it is of paramount importance to measure the influence of the landscape context on biodiversity. Maintaining landscapes with larger forest cover and spatial heterogeneity is essential to keep euglossine species requirements.
Rhamdia quelen, a species of Heptapteridae, is considered to be a complex because of taxonomic and phylogenetic inconsistencies. Determining the physical location of repetitive DNA sequences on the chromosomes and the DNA barcode might increase our understanding of these inconsistencies within different groups of fish. To this end, we analyzed R. quelen populations from two river basins in Brazil, Paraguay and Parana, using DNA barcoding and different chromosomal markers, including U2 snDNA, which has never been analyzed for any Rhamdia species. Cytochrome c oxidase I gene sequence analysis revealed a significant differentiation among populations from the Miranda and Quexada rivers, with genetic distances compatible to those found among different species in neotropical fishes. Our results, in general, revealed a conservative chromosomal evolution in R. quelen and a differential distribution of some markers, such as 5S rDNA and U2 snDNA, in different populations. We suggest that R. quelen must undergo a major revision in its morphological, genetic, and cytogenetic molecular and taxonomic structure to elucidate possible operational taxonomic units.
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