An F2 population derived from a cross between Sorghum bicolor ssp. bicolor ('CK60') and Sorghum bicolor ssp. drummondii ('PI229828') was used to develop an RFLP genetic linkage map of sorghum. The map consists of 201 loci distributed among 10 linkage groups covering a map distance of 1530 cM, with an average 8 cM between adjacent loci. Maize genomic probes (52), maize cDNA probes (124), and sorghum genomic probes (10) were used to define the loci (55, 136, and 10, respectively). Ninety-five percent of the loci fit expected segregation ratios. The loci with distorted segregation ratios were confined almost exclusively to a region of one linkage group. Comparison of sorghum and maize maps indicated high correspondence between the two genomes in terms of loci order and genetic distance. Many loci linked in maize (45 of 55) were also linked in sorghum. Instances of both conserved and rearranged locus orders were detected.

The objective of this study was to use restriction fragment length polymorphisms (RFLPs) to determine the genetic location and effects of genomic regions controlling plant height in sorghum. F2 plants (152) from the cross CK60 x PI229828 were used. Genomic and cDNA clones (106) identified 111 loci distributed among ten linkage groups covering 1299 cM. Interval mapping identified four regions, each in a separate linkage group. These regions may correspond to loci (dw) previously identified by alleles with qualitative effects. Also, these regions identified in sorghum may be orthologous to those previously reported for plant height in maize. Gene effects and gene action varied among genomic regions. In each region, PI229828 alleles resulted in increased plant height. Each region accounted for 9.2-28.7% of the phenotypic variation. Positive, additive effects ranged from 15 to 32cm. Tallness was dominant or overdominant and conferred by alleles from PI229828 for three quantitative trait loci (QTL). At the fourth QTL, PI229828 contributed to increased plant height, but short stature was partially dominant. One digenic interaction was significant. The presence of a PI229828 allele at one region diminished the effects of the other region. A multiple model indicated that these four regions collectively accounted for 63.4% of the total phenotypic variation. The utility of this information for germplasm conversion through backcross breeding is discussed.

The witchesÕ broom disease caused by the fungus Crinipellis perniciosa is the main limiting factor for cocoa production in South America and the Caribbean. In Brazil, this disease affects almost all cocoa-growing regions, causing serious economic, social and ecological damage. The aim of this study was to map genomic regions associated with resistance to C. perniciosa using an F 2 population derived from a cross between ÔScavina-6Õ (resistant) and ÔICS-1Õ (susceptible). The phenotypic index was determined as the average number of vegetative witchesÕ brooms per canopy area of each plant, the witchesÕ brooms were counted and eliminated during six field evaluations between May 1998 and August 1999. A total of 124 random amplified polymorphic DNA (RAPD) and 69 amplified fragment length polymorphism (AFLP) markers were mapped along 25 linkage groups covering 1713 cM of cocoa genome. After employing single factor and composite interval mapping analyses, a major quantitative trait loci (QTL) flanked by the marker AV14.940 was identified in the linkage group 11, explaining almost 35% of the resistance to witchesÕ broom. The present result suggests that this QTL acts as a major dominant component of resistance to this pathogen, with great potential for use in marker-assisted selection procedures in cocoa breeding programmes.

-The study of genetic diversity is fundamental in the preliminary

ABSTRACT. Small farmers have played an important role in maintaining genetic resources of traditional varieties. Collecting and characterizing germplasm, especially landraces and heirloom varieties, are strategic activities that would create a knowledge base describing the traditional varieties of a given region and reduce the risk of genetic erosion. The objectives of this work were as follows: collect sweet potato roots from rural properties and local markets in Rio de Janeiro State, Brazil; characterize the accessions using RAPD and ISSR molecular markers, comparing the efficiency in discrimination of these two types of molecular markers; and estimate the genetic variability of the population. Fifty-nine samples from rural properties and 19 from local markets were studied. A matrix of binary data was developed to analyze the molecular data using the Jaccard index to estimate genetic differences among accessions, and clusters were made using the UPGMA method. The molecular techniques detected genetic variability among the accessions, with cophenetic correlation coefficients (CCC) of 0.80 for RAPDs and 0.89 for ISSRs. The RAPD and ISSR marker results corresponded well, with a correlation of 0.55. All of the accessions were considered distinct, which demonstrates that traditional farmers maintain sweet potato genotypes that have good genetic diversity.Keywords: genetic resources, germplasm characterization, genetic variability, heirloom seeds.Comparação dos marcadores RAPD e ISSR na estimativa da diversideade genética entre acessos de batata-doce (Ipomoea batatas (L.) Lam.) RESUMO. Os pequenos agricultores têm um importante papel na manutenção de recursos genéticos das variedades tradicionais. A coleta e caracterização de germoplasma, especialmente variedades locais e heirloom são atividades estratégicas que permitem o desenvolvimento de conhecimentos sobre as variedades tradicionais de uma determinada região reduzindo o risco de erosão genética. Os objetivos deste trabalho foram: coletar raízes de batata-doce em propriedades rurais e estabelecimentos comerciais do Estado do Rio de Janeiro, Brasil; caracterizar os acessos usando os marcadores moleculares RAPD e ISSR; e estimar a variabilidade genética na população. Cinquenta e nove amostras coletadas em propriedades rurais e em 19 estabelecimentos comerciais foram estudadas. Uma matriz de dados binários foi desenvolvida para análise dos dados moleculares, usando o índice de Jaccard para estimar a dissimilaridade genética entre os acessos, e os grupos foram obtidos usando o método UPGMA. As técnicas moleculares detectaram variabilidade genética entre os acessos, com correlação cofenética de 0,80 para RAPD e 0,89 para ISSR. O resultado obtido com RAPD e ISSR foi correspondente, com uma correlação de 0,55. Todos os acessos coletados foram considerados distintos, o que demonstra que os agricultores tradicionais da região Norte Fluminense detêm genótipos de batata-doce com expressiva diversidade genética.Palavras-chave: recursos genéticos, caracterização de germoplas...

ResumoA resistência genética constitui-se em alternativa sustentável para o controle de doenças em culturas agrícolas, sendo esta, no entanto, dependente da avaliação de populações naturais ou tradicionais visando à ampliação da base genética. Este trabalho relata a avaliação fenotípica de 24 progênies de mamoeiro, oriundas de genótipos crioulos, cultivados por pequenos agricultores no sul do Estado do Espírito Santo. Avaliaram-se características associadas à resistência à pinta-preta, importante doença desta cultura, causada pelo fungo Asperisporium caricae. Para fins comparativos, foram incluídas uma variedade resistente ('Maradol') e uma suscetível ('Golden') à pinta-preta. Pelos parâmetros genéticos estimados, concluiu-se que na população estudada há variabilidade genética quanto à resistência à pinta-preta suficiente para indicar a seleção recorrente como método de melhoramento.Palavras-chave: Asperisporium caricae, Carica papaya, herdabilidade, resistência genética, variabilidade genética. Pathometry, genetic parameters and papaya progenies reaction to black-spot disease AbstractGenetic resistance is a sustainable alternative to control diseases in crops, being indispensable the enlargement of the genetic base to introduce new resistance genes on developing cultivars. This study reports the phenotypic evaluation of 24 papaya progenies, originated of landraces cultivated for small farmers in south of the Espírito Santo State, Brazil. Characteristics related to the resistance to black-spot disease, induced by the fungi Asperisporium caricae were evaluated. For comparison one genotype resistant ('Maradol') and one susceptible ('Golden') to black-spot disease were included on the study. Based on the genetic parameters estimated, the studied population has genetic variability for resistance to black spot diseases appropriates for use of recurrent selection as crop breeding method.

Molecular markers (RAPD, AFLP and microsatellites) were used to generate a linkage map and to identify QTLs associated to witches' broom (Crinipellis perniciosa) resistance in cacao (Theobroma cacao), using 82 individuals of an F 2 population derived from the clones ICS-1 (susceptible) and Scavina-6 (resistant). Fifteen evaluations of the number of brooms have been carried out in six years (1997)(1998)(1999)(2000)(2001)(2002). In order to increase the precision and accuracy in the measures of resistance, each F 2 plant was cloned in three replications in a randomized block design with singletree plots and evaluated over 2 years. Three hundred and forty-two markers were obtained, being 33 microsatellites, 77 AFLPs and 232 RAPDs. The distribution of the number of brooms in the F 2 population was skewed to resistance, suggesting the involvement of major genes controlling resistance and the repeatability estimated for resistance was 44%. A strong putative QTL was detected as being related to witches' broom resistance. Associated to this QTL, the microsatellite mTcCIR35 explained 35.5% of the phenotypic variation in resistance. This marker is being used for marker-assisted selection in Scavina-6 progenies, including those selected in private plantations, as an auxiliary tool to the phenotypic selection.

The dependence of Brazil on imported improved papaya seeds was the main motivation for this research that primarily intended to evaluate the combining ability of eight genotypes from the 'Solo' group, crossed with eight genotypes from the 'Formosa' group following a partial diallel scheme. The traits mean fruit weight, brix degree and flavor revealed prevalence of additive effects in both genetic groups, while plant height was preponderantly additive only for the 'Solo' genotypes. On the other hand, the yield trait expressed additive superiority for the 'Formosa' genotypes. For intrapopulation breeding for higher yield, the indicated genotypes are 'Maradol' and 'Cariflora' from the 'Formosa' group as well 'Sunrise Solo 783' and 'Sunrise Solo TJ' from the 'Solo' group; but, when the objective is to breed for better fruit quality, the genotypes 'JS 12' and 'JS 11' ('Formosa' group), and 'Sunrise Solo72/12' and 'Baixinho de Santa Amália' ('Solo' group) are indicated. Based on the set of evaluated traits, the best hybrid combinations were 'Sunrise Solo 72/12 × JS 12', 'Sunrise Solo TJ × JS 12', 'Baixinho de Santa Amália × JS 12', 'Sunrise Solo TJ X JS 11' and 'Sunrise Solo 72/12 × Costa Rica'.