The gilthead sea bream (Sparus aurata L.) is a marine fish of great importance for fisheries and aquaculture. It has also a peculiar sex-determination system, being a protandrous hermaphrodite. Here we report the construction of a first-generation genetic linkage map for S. aurata, based on 204 microsatellite markers. Twenty-six linkage groups (LG) were found. The total map length was 1241.9 cM. The ratio between sex-specific map lengths was 1:1.2 (male:female). Comparison with a preliminary radiation hybrid (RH) map reveals a good concordance, as all markers located in a single LG are located in a single RH group, except for Ad-25 and CId-31. Comparison with the Tetraodon nigroviridis genome revealed a considerable number of evolutionary conserved regions (ECRs) between the two species. The mean size of ECRs was 182 bp (sequence identity 60-90%). Forty-one ECRs have a known chromosomal location in the pufferfish genome. Despite the limited number of anchoring points, significant syntenic relationships were found. The linkage map presented here provides a robust comparative framework for QTL analysis in S. aurata and is a step toward the identification of genetic loci involved both in the determination of economically important traits and in the individual timing of sex reversal. T HE gilthead sea bream (Sparus aurata L.) is a marine teleost fish that belongs to the family Sparidae. This family contains .100 species, which are divided into two large clades (groups A and B) according to the most recent molecular data (Orrell and Carpenter 2004). Sparids (porgies or sea breams) are demersal fish commonly found in temperate and tropical waters, with a maximum of diversity in the northeast Atlantic and the Mediterranean region (Bauchot and Hureau 1986), and they represent a key element of the coastal marine ecosystem. Sparids are also of great importance for fisheries and aquaculture, being excellent food fish, with high commercial value. S. aurata is the most prominent, with an average cultured production of 100 million metric tons per year. The great importance of the gilthead sea bream for marine aquaculture has fueled an increasing number of studies in many different areas such as immunology, endocrinology, bone morphology, and muscle physiology. Moreover, the genomic tool kit for S. aurata has been constantly improving, as a firstgeneration cDNA microarray was recently reported (Sarropoulou et al. 2005), a preliminary radiation hybrid (RH) map has been constructed (Senger et al. 2006), and a medium-scale expressed sequence tag (EST) sequencing project has been recently completed (A. Canario, personal communication). An improved RH map with .1000 markers (G. Kotoulas, personal communication) and an oligo array representing .10,000 unique transcripts (L. Bargelloni, personal communication) are expected by the end of 2006. Therefore, the genome of the gilthead sea bream is rapidly becoming one of the best characterized among teleost species, apart from classical models such as Brachydanio rerio (zebrafish...
SummaryBackgroundAlthough left-right asymmetries are common features of nervous systems, their developmental bases are largely unknown. In the zebrafish epithalamus, dorsal habenular neurons adopt medial (dHbm) and lateral (dHbl) subnuclear character at very different frequencies on the left and right sides. The left-sided parapineal promotes the elaboration of dHbl character in the left habenula, albeit by an unknown mechanism. Likewise, the genetic pathways acting within habenular neurons to control their asymmetric differentiated character are unknown.ResultsIn a forward genetic screen for mutations that result in loss of habenular asymmetry, we identified two mutant alleles of tcf7l2, a gene that encodes a transcriptional regulator of Wnt signaling. In tcf7l2 mutants, most neurons on both sides differentiate with dHbl identity. Consequently, the habenulae develop symmetrically, with both sides adopting a pronounced leftward character. Tcf7l2 acts cell automously in nascent equipotential neurons, and on the right side, it promotes dHbm and suppresses dHbl differentiation. On the left, the parapineal prevents this Tcf7l2-dependent process, thereby promoting dHbl differentiation.ConclusionsTcf7l2 is essential for lateralized fate selection by habenular neurons that can differentiate along two alternative pathways, thereby leading to major neural circuit asymmetries.
Background: Comparative teleost studies are of great interest since they are important in aquaculture and in evolutionary issues. Comparing genomes of fully sequenced model fish species with those of farmed fish species through comparative mapping offers shortcuts for quantitative trait loci (QTL) detections and for studying genome evolution through the identification of regions of conserved synteny in teleosts. Here a comparative mapping study is presented by radiation hybrid (RH) mapping genes of the gilthead sea bream Sparus aurata, a non-model teleost fish of commercial and evolutionary interest, as it represents the worldwide distributed species-rich family of Sparidae.
Six new microsatellite loci were isolated and characterized in 32 individuals from a farm population of gilthead seabream (Sparus aurata). Expected heterozygosity at all loci was high, ranging from 0.835 to 0.958 with between 10 and 27 alleles per locus. A multiplex polymerase chain reaction protocol was developed using four of the loci. Cross‐species amplification of the loci was tested in six species of the Sparidae family and four loci were successfully amplified in two or more related species.
The challenges of delivering genetically modified crops with nutritional enhancement traits. Nature Plants. 5, pp. 563-567.
SignificanceThe ability of cells to migrate collectively underlies many biological processes. The parapineal is a small group of cells that requires Fgf8 to migrate from the midline to the left side of the zebrafish forebrain. Studying the dynamics of FGF pathway activation reveals that FGF activity is restricted to a few left-sided parapineal cells. Global activation of the FGF pathway interferes with parapineal migration in wild-type embryos, while focal activation in few parapineal cells can restore migration in fgf8−/− mutants, indicating that FGF pathway activation in leading cells is required for collective migration. We show that focal FGF activity is influenced by left-sided Nodal signaling. Our findings may apply to other contexts of FGF-dependent cell migration during development or metastasis.
Intestinal bacteria in marine ¢sh may produce antimicrobial substances which inhibit pathogenic bacteria. The aim of this study was to determine the in£uence of a change of ¢sh diet on the antimicrobial activity of the culturable aerobic gut micro£ora of Senegalese sole, Solea senegalensis. Pre-adult 15month-old ¢sh previously fed on an arti¢cial diet, were fed polychaetes (Hediste diversicolor), which form part of the natural diet of Senegalese sole. Samples were taken 0, 3 and 6 weeks after start of the experiment from the stomach, small and large intestine of the ¢sh. The bacterial strains isolated from these samples were sub-cultured to pure cultures and stored at À 80 1C. Several biochemical tests were run to obtain some basic phenotypic characteristics of the isolated strains. Ampli¢cation and sequencing of 16S rDNA fragments were used to identify the majority of the bacterial strains isolated. The identi¢cation by use of this molecular approach gave results in agreement to the phenotypic characterization. Feeding with polychaetes signi¢cantly increased (Po0.05) the numbers of presumptive Vibrio isolates in the gut. The number of bacterial strains with antimicrobial activity, as determined by two in vitro approaches, was signi¢cantly (Po0.05) increased by feeding with polychaetes.
The striped sea bream (Lithognathus mormyrus) is a coastal marine teleost of commercial importance from the family Sparidae, for which information on stock boundaries is currently lacking. We developed two multiplex PCR for the collective screening of nine polymorphic microsatellite markers for this species. Five primer pairs are specific to L. mormyrus, the remaining four are identical to previously isolated sequences in Sparus aurata and Pagellus bogaraveo. The number of alleles among 40 individuals from the Western Mediterranean ranged from 8 to 20 and observed heterozygosity values ranged between 0.65 and 0.92. F ST estimate obtained between two separate geographic locations indicate that the loci should prove very useful to study genetic population structure in L. mormyrus.
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