On hydrophobic surfaces, roughness may lead to a transition to a superhydrophobic state, where gas bubbles at the surface can have a strong impact on a detected slip. We present two-phase lattice Boltzmann simulations of a Couette flow over structured surfaces with attached gas bubbles. Even though the bubbles add slippery surfaces to the channel, they can cause negative slip to appear due to the increased roughness. The simulation method used allows the bubbles to deform due to viscous stresses. We find a decrease of the detected slip with increasing shear rate which is in contrast to some recent experimental results implicating that bubble deformation cannot account for these experiments. Possible applications of bubble surfaces in microfluidic devices are discussed.

We introduce a new method for mesoscopic modeling of protein diffusion in an entire cell. This method is based on the construction of a three-dimensional digital model cell from confocal microscopy data. The model cell is segmented into the cytoplasm, nucleus, plasma membrane, and nuclear envelope, in which environment protein motion is modeled by fully numerical mesoscopic methods. Finer cellular structures that cannot be resolved with the imaging technique, which significantly affect protein motion, are accounted for in this method by assigning an effective, position-dependent porosity to the cell. This porosity can also be determined by confocal microscopy using the equilibrium distribution of a non-binding fluorescent protein. Distinction can now be made within this method between diffusion in the liquid phase of the cell (cytosol/nucleosol) and the cytoplasm/nucleoplasm. Here we applied the method to analyze fluorescence recovery after photobleach (FRAP) experiments in which the diffusion coefficient of a freely-diffusing model protein was determined for two different cell lines, and to explain the clear difference typically observed between conventional FRAP results and those of fluorescence correlation spectroscopy (FCS). A large difference was found in the FRAP experiments between diffusion in the cytoplasm/nucleoplasm and in the cytosol/nucleosol, for all of which the diffusion coefficients were determined. The cytosol results were found to be in very good agreement with those by FCS.

Capillary penetration of a wetting liquid in a microtomographic image of paper board, whose linear dimension was close to the average length of wood fibers, was simulated by the lattice-Boltzmann method. In spite of the size of the system not being large with respect to the size of structural inhomogeneities in the sample, for unidirectional penetration the simulated behavior was described well by that of the Lucas-Washburn equation, while for radial penetration a radial capillary equation described the behavior. In both cases the average penetration depth of the liquid front as a function of time followed a power law over many orders of magnitude. Capillary penetration of small droplets of liquid was also simulated in the same three-dimensional image of paper. In this case the simulation results could be described by a generalized form of the radial-penetration equation.

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Abstract. On microstructured hydrophobic surfaces, geometrical patterns may lead to the appearance of a superhydrophobic state, where gas bubbles at the surface can have a strong impact on the fluid flow along such surfaces. In particular, they can strongly influence a detected slip at the surface. We present two-phase lattice Boltzmann simulations of a flow over structured surfaces with attached gas bubbles and demonstrate how the detected slip depends on the pattern geometry, the bulk pressure, or the shear rate. Since a large slip leads to reduced friction, our results allow to assist in the optimization of microchannel flows for large throughput.

Pore space characteristics of biochars may vary depending on the used raw material and processing technology. Pore structure has significant effects on the water retention properties of biochar amended soils. In this work, several biochars were characterized with three-dimensional imaging and image analysis. X-ray computed microtomography was used to image biochars at resolution of 1.14 µm and the obtained images were analysed for porosity, pore-size distribution, specific surface area and structural anisotropy. In addition, random walk simulations were used to relate structural anisotropy to diffusive transport. Image analysis showed that considerable part of the biochar volume consist of pores in size range relevant to hydrological processes and storage of plant available water. Porosity and pore-size distribution were found to depend on the biochar type and the structural anisotopy analysis showed that used raw material considerably affects the pore characteristics at micrometre scale. Therefore attention should be paid to raw material selection and quality in applications requiring optimized pore structure.

Liquid droplets impacting a superhydrophobic surface decorated with micro-scale posts often bounce off the surface. However, by decreasing the impact velocity droplets may land on the surface in a fakir state, and by increasing it posts may impale droplets that are then stuck on the surface. We use a two-phase lattice-Boltzmann model to simulate droplet impact on superhydrophobic surfaces, and show that it may result in a fakir state also for reasonable high impact velocities. This happens more easily if the surface is made more hydrophobic or the post height is increased, thereby making the impaled state energetically less favourable.

The behaviour of liquid droplets on inclined heterogeneous surfaces was simulated by the lattice-Boltzmann method using the Shan-Chen multiphase model. The effect of topography of the surface on the contact angle hysteresis was investigated. It is shown in particular, by using anisotropic rough surfaces, how surface topography and thereby the continuity of the three-phase contact line, affect this hysteresis. Our results clearly indicate that the superhydrophobicity of a surface cannot be judged by the contact angle alone.