Numerous bacteria have been found to exhibit the capacity for intracellular polyhydroxyalkanoates (PHA) accumulation. Current methods for PHA production at the industrial scale are based on their synthesis from microbial isolates in either their wild form or by recombinant strains. High production costs are associated with these methods; thus, attempts have been made to develop more cost-effective processes. Reducing the cost of the carbon substrates (e.g., through feeding renewable wastes) and increasing the efficiency of production technologies (including both fermentation and downstream extraction and recovery) are two such examples of these attempts. PHA production processes based on mixed microbial cultures are being investigated as a possible technology to decrease production costs, since no sterilization is required and bacteria can adapt quite well to the complex substrates that may be present in waste material. PHA accumulation by mixed cultures has been found under various operational conditions and configurations at both bench-scale and full-scale production. The process known as "feast and famine" or as "aerobic dynamic feeding" seems to have a high potential for PHA production by mixed cultures. Enriched cultures submitted to a transient carbon supply can synthesize PHA at levels comparable to those of pure cultures. Indeed, the intracellular PHA content can reach around 70% of the cell dry weight, suggesting that this process could be competitive with pure culture PHA production when fully developed. Basic and applied research of the PHA production process by mixed cultures has been carried out in the past decade, focusing on areas such as microbial characterization, process configuration, reactor operational strategies, process modeling and control, and polymer characterization. This paper presents a review of the PHA production process with mixed cultures, encompassing the findings reported in the literature as well as our own experimental results in relation to each of these areas.
Fruit softening is thought to result from extensive cell wall modifications that occur during ripening. These modifications are the result, at least in part, of the activity of members of cell wall-modifying enzymes from the same families involved in the cell wall loosening which promote tissue extension and growth. In this work, the activities of a set of pectolytic and non-pectolytic cell wall-modifying enzymes, namely polygalacturonase (PG; endo-and exo-acting), pectin methylesterase (PME), pectate lyase (PL), -galactosidase (-Gal), ␣-l-arabinofuranosidase (AFase), endo-1,4--glucanase (EGase), xyloglucan endotransglycosylase (XET) and expansin, were monitored during growth and ripening of 'Mondial Gala' apple (Malus × domestica Borkh.) fruit. After optimisation of extraction protocols and standard activity assays, activity could be detected in all the assays, except for endo-PG. The overall results suggest that fruit growth and ripening are possibly coordinated by members of the same families of cell wall-modifying enzymes, although different isoforms may be involved in distinct developmental processes. Based on the trend of total activity measured in vitro using equal amounts of protein per developmental stage, the role of EGase seems to be more prominent during growth than during ripening, and XET activity is most important only after the fruit stopped growing and is maintained throughout ripening. -Gal and AFase activities increased after harvest as the fruit became over-ripe. On the other hand, exo-PG, PL and expansin activities increase from that in unripe fruit to fruit at harvest but are maintained at similar levels thereafter, throughout the over-ripe stages. The patterns of activity observed are discussed in relation to published information about ripening of apples and to results reported using other species.
Molecular characterisation and phenetic similarities between several cultivars of P. communis and P. pyrifolia, and genotypes of P. cordata, P. bourgaeana and P. pyraster were investigated through RAPD markers. Sixty decamer primers were screened, generating polymorphic patterns of Occidental and Oriental pear genotypes. Twenty-two selected primers originated clear and reproducible patterns, produced a total of 358 bands, 327 of them polymorphic. For 10 of the 12 genotypes analysed it was possible to find genotype-specific RAPDs and fragment patterns which could be used for cultivar identification. The patterns distinguished between genotypes and their analysis established a first approach to phenetic classification within the Pyrus genus based on DNA markers, clustering the genotypes according to their geographic origin. RAPD analysis of in vitro and in vivo material of seven cultivars was also performed, resulting in identical patterns for each genotype. #
Variability of commercial plum (Prunus L. sp.) cultivars is unknown since breeding often involves intercrossing hybrids with several species but has been based on a low number of parents. Molecular markers like amplified fragment length polymorphisms (AFLP) and inter-simple sequence repeats (ISSR), which sample multiple loci simultaneously, have become increasingly popular, and were used to characterize 24 diploid and four hexaploid cultivars of plum. Seven AFLP and six ISSR primers were used, and resulted in amplification of 379 and 270 products, respectively. Unweighted pair-group method with arithmetic averages (UPGMA) dendrograms, based on similarity coefficients, reflected a clear separation between diploid and hexaploid plums. Among diploid plums, two pairs of cultivars were relatively distinct from the rest, namely `Golden Japan' and `Methley' and `Ozark Premier' and `Songold'. Furthermore, several cultivars were grouped together both with AFLP and ISSR analysis: 1) `Ambra', `Red Beaut', and `Black Beaut', 2) `Black Diamond' and `Royal Diamond', 3) `June Rose', `Santa Rosa', and `Royal Red', and iv) `Freedom', `Larry Ann', and `Queen Rosa'. Although the phenetic classification obtained by the two methods were similar (r = 0.73, for the diploid group), ISSR had a higher reproducibility and percentage of polymorphisms (87.4% vs. 62.8%) than AFLP. Methodological aspects of both markers systems are discussed. Results obtained suggest that the AFLP and ISSR approaches are valuable tools for identification of specific genotypes and analysis of phenetic relationships in plum.
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