“…qPCR; quantitative polymerase chain reaction, ELISA; enzyme-linked immunosorbent assay, RIA; radio immunoassay, MALDI-TOF; matrix assisted laser desorption/ionization time-of-flight, ATP; adenosine triphosphate, PMA: propidium monoazide, QCM: quartz crystal microbalance, SPR: surface plasmon resonance, FET: field effects transistor, UVAPS: ultraviolet aerodynamic particle sizer. Detection method | Type of detection | Specific to state of virus | Limitation | Comments | References |
Culturing techniques | Plaque | Only plaque forming virus | Specific culture conditions necessary; cannot be used for non-infectious viruses | | ( Brooke, 2014 ) |
TCID50 | Both plaque forming and non-plaque forming infectious viruses |
Molecular | qPCR, droplet digital PCR | Plaque forming, non-plaque forming, and dead viruses (with intact DNA/RNA) | Quantification may be highly affected by contamination, nucleic acid extraction and improper sampling; time consuming | | ( Kim et al, 2021 , Sharma Ghimire et al, 2019 ) |
Isothermal techniques |
PMA-qPCR | Differentiate intact from compromised virions | ( Bonifait et al, 2015 ) |
Immunoassay (Chemical tracer/Biochemical assay) | ELISA | Both plaque forming and non-plaque forming infectious virus. Dead virus and specific protein of a virus | Time consuming; knowledge about specific antibodies | No report on viral aerosols yet | ( Ghosh et al, 2015b ) |
RIA | Specific chemical labeling |
Neuraminidase (NA) activity | Both plaque forming and non-plaque forming infectious viruses | NA activities are present for several viruses including influenza A, B, parainfluenza, and rubella viruses. |
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