A hierarchical equations of motion based numerical approach is developed for accurate and efficient evaluation of dynamical observables of strongly correlated quantum impurity systems. This approach is capable of describing quantitatively Kondo resonance and Fermi-liquid characteristics, achieving the accuracy of the latest high-level numerical renormalization group approach, as demonstrated on single-impurity Anderson model systems. Its application to a two-impurity Anderson model results in differential conductance versus external bias, which correctly reproduces the continuous transition from Kondo states of individual impurity to singlet spin states formed between two impurities. The outstanding performance on characterizing both equilibrium and nonequilibrium properties of quantum impurity systems makes the hierarchical equations of motion approach potentially useful for addressing strongly correlated lattice systems in the framework of dynamical mean-field theory.
Metal nanoparticles are important in several emerging technologies, but their size-selected thermodynamic properties are hard to obtain from experiment. We have characterized the energetic and structural properties of unsupported neutral Aln (2
A Pt/W–SBA-15 catalyst with an extremely low W/Si atomic ratio of 1/640 affords 1,3-PDO with high selectivity and yield in the hydrogenolysis of glycerol.
Efficient simulation methods are presented for determining the standard Gibbs free energy changes for the reactions, M + M n-1 T M n (R1), involved in the formation of atomic clusters and nanoparticles (also called particles) in the vapor phase. The standard Gibbs free energy of formation (∆ f G°) of a particle is obtained from these Gibbs free energy changes (∆G°) by a recursion relationship using the experimental ∆ f G°of the monomer. In the present study, this method has been applied to reactions involving Al n particles with n ) 2-60. This method has been validated for n ) 2, where the experimental thermodynamic properties of Al 2 have been recompiled using the latest available experimental or highly accurate theoretical data. For n ) 2-4, two completely different approaches, a Monte Carlo configuration integral (MCCI) integration of partition functions and a Monte Carlo direct simulation of the equilibrium constants (MCEC), employing four wellvalidated potential energy functions have been used to calculate ∆G°of R1. Excellent agreement is observed for these two methods. Although different potential energy functions give different stage-1 results for n e 10, three high-level correction (HLC) terms, namely, a correction for the potential energy difference of the global minima, another for the electronic excitation contribution, and a third based on calculating isomericrovibrational contribution, have been applied to mitigate deficiencies in the potential energy functions. For n ) 2, good agreement has been found between the corrected simulation results and experimental data. For larger n, the more efficient MCEC method has been used. Finally, accurate ∆G°of R1 and thus ∆ f G°of Al n particles with n ) 2-60 have been determined. This is the first example of the determination of nanoparticle free energies of formation.
Diabatic potential energy surfaces are a convenient starting point for dynamics calculations of photochemical processes, and they can be calculated by the fourfold way direct diabatization scheme. Here we present an improved definition of the reference orbital for applying the fourfold way direct diabatization scheme to ammonia. The improved reference orbital is a geometry-dependent hybrid orbital that allows one to define consistent dominant configuration lists at all geometries important for photodissociation. Using diabatic energies calculated with the new reference orbital and consistent dominant configuration lists, we have refitted the analytical representations of the ground and the first electronically excited singlet-state potential energy surfaces and the diabatic coupling surface. Improved functional forms were used to reproduce the experimental dissociation energies and excitation energies, which will be important for subsequent simulations of photochemical dynamics. We find that the lowestenergy conical intersection point is at 5.16 eV, with C 2v symmetry. Electronic supplementary materialThe online version of this article
This article presents a perspective on thermodynamic characterization of metal nanoparticles by computational chemistry. Topics emphasized include structural stability, phases, phase changes, and free energy functions of aluminum nanoparticles.
Propane dehydrogenation over perfect Ga 2 O 3 (100) was studied in detail by periodic density functional theory (DFT) calculations. It was found that the initial C-H bond activation mainly follows a radical mechanism that the two-coordinated surface oxygen site (O(2)) abstracts a hydrogen atom from propane with the formation of propyl radical and hydroxyl group (O(2)H). Physically adsorbed propyl radical can easily form propoxide or propylgallium intermediate. Subsequently, propene is formed by a second H abstraction from propyl, propoxide, or propylgallium by surface oxygen and Ga sites. H abstraction by O(2) site always has low energy barrier. However, it is difficult for the hydrogen atoms in the hydroxyl groups to leave the surface in the form of either H 2 or H 2 O. In addition, propene formed through H abstraction by oxygen site has high adsorption energy and is prone to further dehydrogenation or oligomerization, leading to fast deactivation of the catalyst. On the other hand, the formation of H 2 from GaH and hydroxyl group is much easier, although the formation of GaH has to overcome high energy barrier. Thus, there is a shift of rate-determining step for propane dehydrogenation: at the initial stage of the reaction, the rate-determining step is H abstraction by oxygen sites and then it shifts to H abstraction from various propyl sources by Ga sites to form gallium hydrides after the surface oxygen sites are consumed. Our results also indicate that dehydrogenation of propane mainly follows a direct dehydrogenation mechanism (DDH), whereas oxidative dehydrogenation (ODH) is energetically less feasible but cannot be ruled out in the presence of mild oxidant such as CO 2 .
BackgroundAngiogenesis plays an important role in a wide range of physiological processes, and many diseases are associated with the dysregulation of angiogenesis. Radix Astragali is a Chinese medicinal herb commonly used for treating cardiovascular disorders and has been shown to possess angiogenic effect in previous studies but its active constituent and underlying mechanism remain unclear. The present study investigates the angiogenic effects of calycosin, a major isoflavonoid isolated from Radix Astragali, in vitro and in vivo.Methodology Tg(fli1:EGFP) and Tg(fli1:nEGFP) transgenic zebrafish embryos were treated with different concentrations of calycosin (10, 30, 100 µM) from 72 hpf to 96 hpf prior morphological observation and angiogenesis phenotypes assessment. Zebrafish embryos were exposed to calycosin (10, 100 µM) from 72 hpf to 78 hpf before gene-expression analysis. The effects of VEGFR tyrosine kinase inhibitor on calycosin-induced angiogenesis were studied using 72 hpf Tg(fli1:EGFP) and Tg(fli1:nEGFP) zebrafish embryos. The pro-angiogenic effects of calycosin were compared with raloxifene and tamoxifen in 72 hpf Tg(fli1:EGFP) zebrafish embryos. The binding affinities of calycosin to estrogen receptors (ERs) were evaluated by cell-free and cell-based estrogen receptor binding assays. Human umbilical vein endothelial cell cultures (HUVEC) were pretreated with different concentrations of calycosin (3, 10, 30, 100 µM) for 48 h then tested for cell viability and tube formation. The role of MAPK signaling in calycosin-induced angiogenesis was evaluated using western blotting.ConclusionCalycosin was shown to induce angiogenesis in human umbilical vein endothelial cell cultures (HUVEC) in vitro and zebrafish embryos in vivo via the up-regulation of vascular endothelial growth factor (VEGF), VEGFR1 and VEGFR2 mRNA expression. It was demonstrated that calycosin acted similar to other selective estrogen receptor modulators (SERMs), such as raloxifene and tamoxifen, by displaying selective potency and affinity to estrogen receptors ERα and ERβ. Our results further indicated that calycosin promotes angiogenesis via activation of MAPK with the involvement of ERK1/2 and ER. Together, this study revealed, for the first time, that calycosin acts as a selective estrogen receptor modulator (SERM) to promote angiogenesis, at least in part through VEGF-VEGFR2 and MAPK signaling pathways.
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