Irawati W, Ompusunggu NP, Susilowati DN, Yuwono T. 2019. Molecular and physiological characterization of indigenous copper-resistant bacteria from Cikapundung River, West Java, Indonesia. Biodiversitas 20: 344-349. The use of indigenous bacteria as bioremediation agents in wastewater treatments plant is a promising solution for tackling the environmental problem. The objectives of this research were to establish the phylogenetic tree and physiological characterization of copper-resistant bacteria isolated from Cikapundung River, West Java, Indonesia. A phylogenetic tree was constructed based on 16S rDNA sequences. Physiological characterization including growth and the potency of bacterial strain for copper accumulation and copper removal was also studied. Five highly copper-resistant bacteria designated as strains CN1, CN2, CN5, CN6, and CN8 have been isolated from Cikapundung river with the MICs (Minimum Inhibitory Concentration) of 5 mM-8mM. Sequence alignment and phylogenetic analysis showed that strains CN1 and CN6 belong to Klebsiella pneumoniae with the similarity of 99%. Meanwhile, strain CN2, CN5, and CN8 belong to Acinetobacter calcoaceticus, Acinetobacter sp. and Escherichia coli with the similarity of 99%, 96%, and 95%, respectively. The highest resistant bacterial isolates were strains CN6 and CN8 with the MICs of 8 mM. The highest accumulation capability was found in strain CN1 with a total of 4.62 mg/g dry weight of cells. Meanwhile, strain CN8 demonstrated the highest copper removal with the value of 48.15%.
Osmotolerant rhizobacterial isolates were used as inoculants for rice under different drought conditions in a greenhouse. Rice was grown on a Regosol, under either sterile or non-sterile conditions, in which the water level was adjusted to 80% and 40% of field capacity. Rice seed was inoculated with osmotolerant rhizobacterial isolates (isolates Al-19, A82, and M7b) and grown until the plant reached maximum vegetative phase (86 days from seed sowing). Inocula used were: Al-19 plus A82, Al-19 plus M7b, A82 plus M7b, and a mixture of 3 isolates. Under sterile conditions, inoculation of rice with the different inocula resulted in an increase in shoot dry weight, root dry weight, and number of tillers of 0–45.72%, 0.62–79.67%, and 0– 61.11%, respectively. Under non-sterile condition, shoot dry weight, root dry weight, and number of tillers increased by 19.66–28.04%, 14.00–91.33%, and 14.29–157.14%, respectively. The study also demonstrated that the role of osmotolerant rhizobacteria was more pronounced at 40% field capacity than 80% field capacity.
Copper resistant bacteria can be isolated from environments where copper levels are abundant from mining, industrial, or agricultural activities. The aim of this work was to study the molecular and physiologicalcharacteristics of indigenous copper resistant bacteria isolated from activated sludge in an industrial wastewatertreatment plant in Surabaya, Indonesia. The bacterial isolates were designated as strains IrC1, IrC2, and IrC4. Phylogenetic analysis based on 16S rDNA sequence analysis identified isolates IrC1, IrC2, and IrC4 as Acinetobacter oleivorans (98.41% similarity), Acinetobacter pitii (97.22% similarity), and Cupriavidus pauculus (96.99 similarity), respectively. The addition of 5 mM of CuSO4 in the medium affected morphological 4 appearance of all isolates to green and undulate margin might be due to the survival mechanism of bacteria by absorbing the copper. This studies indicated that copper resistance mechanism of all isolates was facilitated through the bioaccumulation of copper inside the cell, especially on the membrane fraction and inside the cytoplasm, albeit at a limited amount. It was observed that isolates IrC1, IrC2, and IrC4 were capable of accumulating 137.23 , 364.66 , and 272.07 mg L-1 of copper, respectively from the medium containing 8 mM CuSO4. The capability of isolates IrC1, IrC2, and IrC4 to accumulate copper can be exploited in bioremediation 4 process for removing copper from industrial sewage
Abstract. Irawati W, Pinontoan R, Mouretta B, Yuwono T. 2021. The potential of copper-resistant bacteria Acinetobacter sp. strain CN5 in decolorizing dyes. Biodiversitas 23: 680-686. Bacteria with multi-resistance to copper and dyes may be employed in bioremediation of copper and dye waste more effectively than physical or chemical remediation. This study aims at determining the effect of the addition of various textile dyes and copper on the growth of Acinetobacter sp. CN5 and its ability to decolorize dyes. The dye resistance test was carried out by inoculating bacterial isolates into Luria Bertani media containing 50, 100, 150, 200, 250, 300, 350, 400, 450, and 500 ppm dyes. The twelve dyes used in the test were methylene blue, malachite green, congo red, mordant orange, reactive black, direct yellow, basic fuchsine, reactive orange, dispersion orange, remazol red, wantex yellow, and wantex red. The decolorization activity was analyzed by spectrophotometry at a 300-900 nm wavelength. The study results demonstrated that bacteria thrived in media containing 50 ppm of all dyes, except malachite green dye. Acinetobacter sp. CN5 was found to be resistant to up to 500 ppm methylene blue, basic fuchsine, and wantex red and resistant to congo red at 450 ppm. Acinetobacter sp. CN5 was also able to decolorize methylene blue, congo red, basic fuchsine, and red wantex by 57.64%, 53.17%, 91.37%, and 67.50%, respectively. The addition of 5 mM CuSO4 to the medium increased the ability of Acinetobacter sp. CN5 to decolorize the congo red from 57.64% to 82.58%.
Abstract. Ambarwati A, Wahyuono S, Moeljopawiro S, Yuwono T. 2020. Antimicrobial activity of ethyl acetate extracts of Streptomyces sp. CRB46 and the prediction of their bioactive compounds chemical structure. Biodiversitas 21: 3380-3390. The goal of the research was to determine the antimicrobial activity of ethyl acetate extracts of Streptomyces sp. CRB46 and predict their chemical structure of the bioactive compounds based on the AntiSMASH analysis of the whole genome sequencing. Streptomyces sp. CRB46 was isolated from Cyperus rotundus L. rhizosphere in the Cemoro Sewu highland, Indonesia (1920 meters above sea level). The results showed that the supernatant ethyl acetate (EAS) extract could inhibit 11 of 12 tested microorganisms with a diameter of the inhibition zone ranging from 17-35 mm (paper disc method). The supernatant extract was found more effective in inhibiting microorganisms than the ethyl acetate extract of pellets (EAP). The EAP extract was only able to inhibit the growth of seven tested microorganisms (16-26 mm). The results of LCMS analysis showed that crude extract of EAS consisted of 20 mixtures of organic compounds. Based on FTIR analysis, 16 functional groups were found in the EAS extracts. In addition, based on AntiSMASH analysis, it was also found that Streptomyces sp. CRB46 produced eight classes of bioactive compounds, but only six compounds have been identified as their chemical structures. It can, therefore, be concluded that Streptomyces sp. CRB46 has the potential to produce bioactive compounds that can be used for microbial infection treatment.
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