Little is known about the infiltrative pattern of innate immune cells in primary melanoma compared with their paired metastases and in BRAFV600E-mutated tumors. Therefore, our aim was to characterize the inflammatory microenvironment in primary ulcerated and nonulcerated melanomas and paired metastases, to investigate the relation between inflammation and BRAFV600E mutation in primary melanoma and paired metastases, and to evaluate the effect of the analyzed biomarkers on melanoma-specific survival. A total of 385 primary tumors and 96 paired metastases were stained with immunohistochemistry for BRAFV600E, CD163+ macrophages, CD123+ plasmacytoid dendritic cells, CD66b+ neutrophils, and E-cadherin and estimated using objective computer-assisted image analysis. BRAFV600E was semiquantitatively scored as either present or absent. In metastases of nonulcerated melanomas, we observed higher neutrophil (P=0.02) and macrophage (P=0.01) numbers. In the metastases of ulcerated melanomas, we found a higher number of macrophages (P<0.0001). Increase in the neutrophil numbers in the metastases was associated with poor patient survival after first relapse (hazard ratio=1.19, 95% confidence interval: 1.03–1.38, P=0.02). BRAFV600E-positive primary tumors (P=0.02) and metastases (P=0.01) exhibited increased plasmacytoid dendritic cell numbers compared with BRAFV600E-negative tumors. Lastly, primary melanomas in men had higher neutrophil numbers than women (P≤0.0001), and men had worse melanoma-specific survival (hazard ratio=1.52, 95% confidence interval: 1.04–2.21, P=0.03). Our data show that melanoma metastases are densely infiltrated with neutrophils, which affects survival. Our results also highlight the importance of recognizing the presence of inflammatory cells in the metastases as a prognostic marker, and that they may potentially be used to improve the precision of immunotherapy and BRAFV600E targeted therapy.
Checkpoint inhibitors are novel and promising treatment options for different types of cancer. Programmed cell death 1 (PD-1) inhibitors, such as pembrolizumab, have been shown to significantly raise the survival rates of disseminated malignant melanoma (MM). Autoimmune adverse reactions are very common in checkpoint inhibitors. We present 2 cases of bullous pemphigoid, as adverse reactions to pembrolizumab-treated MM.
Purpose: Checkpoint inhibitors have significantly improved treatment of metastatic melanoma. However, 40–60% of patients do not respond to therapy, emphasizing the need for better predictive biomarkers for treatment response to immune checkpoint inhibitors. Prorammed death-ligand 1(PD-L1) expression in tumor cells is currently used as a predictive biomarker; however, it lacks specificity. Therefore, it is of utmost importance to identify other novel biomarkers that can predict treatment outcome. Experimental design: We studied a small cohort of 16 patients with advanced-stage melanoma treated with first-line checkpoint inhibitors. Plasma samples were collected prior to treatment initiation and continuously during the first year of treatment. Circulating tumor DNA (ctDNA) level and the expression of ten inflammatory cytokines were analyzed. Results: We found that the ctDNA-level in a blood sample collected after 6–8 weeks of therapy is predictive for response to checkpoint inhibitors. Patients with undetectable ctDNA had significantly longer progression-free survival (PFS) compared with patients with detectable ctDNA (median 26.3 vs. 2.1 months, p = 0.006). In parallel, we identified that high levels of the cytokines monocyte chemoattractant protein 1 (MCP1) and tumor necrosis factor α(TNFα) in baseline blood samples were significantly associated with longer PFS compared to low level of these cytokines (median not reached vs. 8.2 months p = 0.0008). Conclusions: These findings suggest that the levels of ctDNA, MCP1, and TNFα in baseline and early follow-up samples can predict disease progression in metastatic melanoma patients treated with checkpoint inhibitors. Potentially, these minimally invasive biomarkers may identify responders from non-responders.
Background: Checkpoint inhibitors have revolutionized the treatment of metastatic melanoma, yielding long-term survival in a considerable proportion of the patients. Yet, 40–60% of patients do not achieve a long-term benefit from such therapy, emphasizing the urgent need to identify biomarkers that can predict response to immunotherapy and guide patients for the best possible treatment. Here, we exploited an unsupervised machine learning approach to identify potential inflammatory cytokine signatures from liquid biopsies, which could predict response to immunotherapy in melanoma. Methods: We studied a cohort of 77 patients diagnosed with unresectable advanced-stage melanoma undergoing treatment with first-line nivolumab plus ipilimumab or pembrolizumab. Baseline and on-treatment plasma samples were tested for levels of PD-1, PD-L1, IFNγ, IFNβ, CCL20, CXCL5, CXCL10, IL6, IL8, IL10, MCP1, and TNFα and analyzed by Uniform Manifold Approximation and Projection (UMAP) dimension reduction method and k-means clustering analysis. Results: Interestingly, using UMAP analysis, we found that treatment-induced cytokine changes measured as a ratio between baseline and on-treatment samples correlated significantly to progression-free survival (PFS). For patients treated with nivolumab plus ipilimumab we identified a group of patients with superior PFS that were characterized by significantly higher baseline-to-on-treatment increments of PD-1, PD-L1, IFNγ, IL10, CXCL10, and TNFα compared to patients with worse PFS. Particularly, a high PD-1 increment was a strong individual predictor for superior PFS (HR = 0.13; 95% CI 0.034–0.49; p = 0.0026). In contrast, decreasing levels of IFNγ and IL6 and increasing levels of CXCL5 were associated with superior PFS in the pembrolizumab group, although none of the cytokines were individually predictors for PFS. Conclusions: In short, our study demonstrates that a high increment of PD-1 is associated with superior PFS in advanced-stage melanoma patients treated with nivolumab plus ipilimumab. In contrast, decreasing levels of IFNγ and IL6, and increasing levels of CXCL5 are associated with response to pembrolizumab. These results suggest that using serial samples to monitor changes in cytokine levels early during treatment is informative for treatment response.
BackgroundCheckpoint inhibitors have significantly improved treatment of metastatic melanoma. Yet, 40–60% of the patients do not achieve a long-term benefit from such immunotherapy. Thus, there is an urgent need to identify biomarkers that can predict response to immunotherapy to guide patients for the best possible treatment. Here, we evaluate an unsupervised machine learning approach to identify potential cytokine signatures from liquid biopsies that predict response to immunotherapy in melanoma.MethodsBlood samples were drawn from 74 patients diagnosed with unresectable advanced-stage melanoma undergoing treatment with first-line nivolumab/ipilimumab or pembrolizumab between August 2017 – July 2019 at Aarhus University Hospital, Denmark. Blood samples were tested for plasma levels of PD-1, PD-L1, IFN-beta, IFN-gamma, CCL20, CXCL5, CXCL10, IL6, IL8, IL10, MCP1, and TNF-alpha by Meso Scale ELISA assays. Healthy controls were used to compare general cytokine levels in plasma. A bioinformatic workflow consisting of Uniform Manifold Approximation and Projection (UMAP) dimension reduction method and k-means clustering analysis was applied to define clusters based on the cytokine profile, followed by survival analysis of the clusters.ResultsUMAP analysis demonstrated that the cytokine profile at baseline was similar for healthy controls and patients, regardless of treatment. Upon treatment initiation, the cytokine profile changed in a treatment-dependent way to be significantly different between patient groups. Clustering defined by the cytokine profile measured early during treatment in nivolumab/ipilimumab treated patients identified two clusters associated with superior progression-free survival (PFS) (log-rank p=0.018). We identified that these cluster were characterized by significantly higher levels of PD-1, CXCL10, and TNF-alpha. UMAP analysis of the cytokine level as fold change over baseline level, confirmed that nivolumab/ipilimumab patients with superior PFS were characterized by higher levels of PD-1, CXCL10, and TNF-alpha. Cox regression analysis revealed high fold change of PD-1 as a strong predictor for superior PFS (HR=0.29; 95% CI 0.12–0.66; p=0.0032). However, a similar cytokine profile was not associated to superior PFS in patients receiving pembrolizumab, suggesting that the cytokine signature is specific for nivolumab/ipilimumab treatment.ConclusionsUsing unsupervised machine learning we identified a cytokine signature of high PD-1, CXCL10, and TNF-alpha to be associated with superior PFS in advanced-stage melanoma patients treated with nivolumab/ipilimumab but not pembrolizumab, with high fold change of PD-1 being a strong individual predictor for PFS.AcknowledgementsWe thank the medical laboratory technicians who collected blood samples and the patients who participated in the study.Ethics ApprovalThe study was approved by Central Denmark Region Committees on Biomedical Research Ethics, approval number 1-10-72-374-15.
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