The encounter between Meloidogyne species and tomato is many centuries old. Meloidogyne species are known to cause high levels of economic loss worldwide in a multitude of agricultural crops, including tomato. This review was initiated to provide an overview of the damage potential of Meloidogyne spp. on cultivars of tomato (Solanum lycopersicum), and to compile the different studies done on the management of Meloidogyne spp. on tomato with particular emphasis on the Mi resistance gene. Numerous studies have been conducted to assess the damage potential of root-knot nematode on various tomato cultivars; its yield loss potential ranges from 25 to 100%. A range of management options from using synthetic nematicides to soilless cultures have been tried and are available for managing Meloidogyne spp. Resistant commercial cultivars and rootstocks carrying the Mi gene have been used successfully to manage Meloidogyne incognita, M. javanica and M. arenaria. However, virulent populations have been detected. Relying on a single root-knot nematode management strategy is an outdated concept and different management options should be used in an integrated management context by considering the whole system of disease management. In future management of Meloidogyne species, care must be taken in directly extrapolating the tolerance limit determined elsewhere, since it is affected by many factors such as the type of initial inoculum and physiological races of Meloidogyne spp., environmental conditions, types of cultivars and experimental approaches used.

To identify loci linked to nematode resistance genes, a total of 126 of CIMMYT advanced spring wheat lines adapted to semi-arid conditions were screened for resistance to Heterodera avenae, Pratylenchus neglectus, and P. thornei, of which 107 lines were genotyped with 1,310 DArT. Association of DArT markers with nematode response was analyzed using the general linear model. Results showed that 11 markers were associated with resistance to H. avenae (pathotype Ha21), 25 markers with resistance to P. neglectus, and 9 significant markers were identified to be linked with resistance to P. thornei. In this work we confirmed that chromosome 4A (~90–105 cM) can be a source of resistance to P. thornei as has been recently reported. Other significant markers were also identified on chromosomal regions where no resistant genes have been reported for both nematodes species. These novel QTL were mapped to chromosomes 5A, 6A, and 7A for H. avenae; on chromosomes 1A, 1B, 3A, 3B, 6B, 7AS, and 7D for P. neglectus; and on chromosomes 1D, 2A, and 5B for P. thornei and represent potentially new loci linked to resistance that may be useful for selecting parents and deploying resistance into elite germplasm adapted to regions where nematodes are causing problem.

Cereal cyst nematodes (CCNs) can cause significant economic yield losses alone or in combination with other biotic and abiotic factors. The damage caused by these nematodes can be enormous when they occur in a disease complex, particularly in areas subject to water stress. Of the 12 valid CCN species, Heterodera avenae, H. filipjevi, and H. latipons are considered the most economically important in different parts of the world. This paper reviews current approaches to managing CCNs via genetic resistance, biological agents, cultural practices, and chemical strategies. Recent research within the soil borne pathogen program of the International Maize and Wheat Improvement Center has focused on germplasm screening, the potential of this germplasm as sources of resistance, and how to incorporate new sources of resistance into breeding programs. Breeding for resistance is particularly complicated and difficult when different species and pathotypes coexist in nature. A lack of expertise and recognition of CCNs as a factor limiting wheat production potential, combined with inappropriate breeding strategies and slow screening processes limit genetic gains for resistance to CCNs.

Endophytic bacteria were isolated from coffee roots in Ethiopia and identified by Fatty Acid Methyl Ester-Gas Chromatography (FAME-GC). A total of 201 and 114 endophytic bacteria were isolated and identified during the wet and dry seasons, respectively. The most abundant genera were Pseudomonas, Bacillus, Agrobacterium, Stenotrophomonas and Enterobacter. Population densities were higher during the wet season than the dry season ranging from 5.2 × 10 3 to 2.07 × 10 6 cfu (g fresh root weight) −1 . Culture filtrates of the bacterial isolates showed nematicidal effects of between 38 and 98%. The most active strains were Agrobacterium radiobacter, Bacillus pumilus, B. brevis, B. megaterium, B. mycoides, B. licheniformis, Chryseobacterium balustinum, Cedecea davisae, Cytophaga johnsonae, Lactobacillus paracasei, Micrococcus luteus, M. halobius, Pseudomonas syringae and Stenotrophomonas maltophilia. Bacillus pumilus and B. mycoides were most effective in reducing the number of galls and egg masses caused by M. incognita by 33 and 39%, respectively.

Phasmarhabditis bohemica n. sp. is described and illustrated from the body of Deroceras reticulatum from the village of Chelčice, the Czech Republic. Morphological and molecular data showed that the new isolate is close to other species of Phasmarhabditis, particularly P. californica and P. papillosa. Females are characterised by a body length of 2079 (1777-2222) μm and a long tapering tail with prominent papilliform phasmids located laterally in the mid-tail region. Males are 1683 (1515-1818) μm long. They have a peloderan bursa, with nine pairs of rays, 1/1/1/2/1/3, and a reflexed testis 495 (434-555) μm long. Dauer juveniles are thin, 553 (474-636) μm long, with prominent lateral fields consisting of two prominent ridges and three incisures. Small subunit (18S), ITS, and D2-D3 expansion segments of the large subunit of ribosomal DNA were used to analyse the phylogenetic relationships of sequenced species in Phasmarhabditis and other closely related species. Our preliminary observations suggest that the newly described species may be a facultative mollusc-parasitic nematode that is able to survive permanently in the saprobic phase on decaying organic matter. The ecology, morphology, and phylogenetic positions of P. bohemica n. sp. are discussed.

Abstract:The bacterium Pasteuria penetrans is a parasite of root-knot nematodes (Meloidogyne spp.). Endospores of P. penetrans attach to the cuticle of second-stage juveniles (J2) and subsequently sterilize infected females. When encumbered by large numbers of spores, juveniles are less mobile and their ability to infect roots is reduced. This study looked at different factors that influence spore attachment of P. penetrans to the root-knot nematode Meloidogyne arenaria. Pretreatment of J2 with root exudates of eggplant (Solanum melongena cv. Black beauty) reduced spore attachment compared with pretreatment with phosphate-buffered saline (PBS), suggesting that the nematode surface coat was altered or the spore recognition domains on the nematode surface were blocked. Spore attachment was equally reduced following exposure to root exudates from both host and nonhost plants for M. arenaria, indicating a common signal that affects spore attachment. Although phytohormones have been shown to influence the lipophilicity of the nematode surface coat, auxins and kinetins did not affect spore attachment compared with PBS. Root exudates reduced spore attachment more in sterilized soil than in natural soil. Sterilization may have eliminated microbes that consume root exudates, or altered the chemical components of the soil solution or root exudates. Root exudates caused a greater decrease in spore attachment in loamy sand than in a sandy loam soil. The sandy loam had higher clay content than the loamy sand, which may have resulted in more adsorption of compounds in the root exudates that affect spore attachment. The components of the root exudates could have also been modified by soil type. The results of this study demonstrate that root exudates can decrease the attachment of P. penetrans endospores to root-knot nematodes, indicating that when these nematodes enter the root zone their susceptibility to spore attachment may decrease.

Phasmarhabditis bonaquaense n. sp. is described and illustrated from the body of Malacolimax tenellus, from the locality of České Švýcary near the village of Dobrá Voda, the Czech Republic. Females are characterized by a body length of 2349 (1878-2626) µm and a cupola shaped tail with a long hyaline hair-like tail tip. Extremely prominent papilla-like phasmids present. Males 1829 (1414-2121) µm long. Peloderan bursa with nine pairs of rays (papillae), 1/1/1/2/1/3. One non-paired apparent papilla-like structure located near the ventral appendage anterior to the cloaca. Prominent papilla-like phasmids located close to the tail tip. Small subunit (18S), ITS, and D2-D3 expansion segments of the large subunit of ribosomal DNA were used to analyze the phylogenetic relationships of sequenced species in the genus Phasmarhabditis and other closely related species. Phasmarhabditis bonaquaense n. sp. varied from other related nematodes both in morphological characterizations and phylogenetic analysis. The life cycle of the newly described species is not well known but it is probably a facultative, mollusc-parasitic nematode able to survive permanently in the saprobic phase on decaying organic matter.

A survey of Miscanthus × giganteus and switchgrass plots throughout the midwestern and southeastern United States was conducted to determine the occurrence and distribution of plant-parasitic nematodes associated with these biofuel crops. During 2008, rhizosphere soil samples were collected from 24 Miscanthus × giganteus and 38 switchgrass plots in South Dakota, Iowa, and Illinois. Additional samples were collected from 11 Miscanthus × giganteus and 10 switchgrass plots in Illinois, Kentucky, Georgia, and Tennessee the following year. The 11 dominant genera recovered from the samples were Pratylenchus, Helicotylenchus, Xiphinema, Longidorus, Heterodera, Hoplolaimus, Tylenchorhynchus, Criconemella, Paratrichodorus, Hemicriconemoides, and Paratylenchus. Populations of Helicotylenchus, Xiphinema, and Pratylenchus were common and recorded in 90.5, 83.8, and 91.9% of the soil samples from Miscanthus × giganteus, respectively, and in 91.6, 75, and 83.3% of the soil samples from switchgrass, respectively. Prominence value (PV) (PV = population density × √frequency of occurrence/10) was calculated for the nematodes identified. Helicotylenchus had the highest PV (PV = 384) and was followed by Xiphinema (PV = 152) and Pratylenchus (PV = 72). Several of the nematode species associated with the two biofuels crops were plant parasites. Of these, Pratylenchus penetrans, P. scribneri, P. crenatus, Helicotylenchus pseudorobustus, Hoplolaimus galeatus, X. americanum, and X. rivesi are potentially the most damaging pests to Miscanthus × giganteus and switchgrass. Due to a lack of information, the damaging population thresholds of plant-parasitic nematodes to Miscanthus × giganteus and switchgrass are currently unknown. However, damage threshold value ranges have been reported for other monocotyledon hosts. If these damage threshold value ranges are any indication of the population densities required to impact Miscanthus × giganteus and switchgrass, then every state surveyed has potential for yield losses due to plant-parasitic nematodes. Specifically, Helicotylenchus, Xiphinema, Pratylenchus, Hoplolaimus, Tylenchorhynchus, Criconemella, and Longidorus spp. were all found to have population densities within or above the threshold value ranges reported for other monocotyledon hosts.