Replacement of the average numerator relationship matrix derived from the pedigree with the realized genomic relationship matrix based on DNA markers might be an attractive strategy in forest tree breeding for predictions of genetic merit. We used genotypes from 3461 single-nucleotide polymorphism loci to estimate genomic relationships for a population of 165 loblolly pine (Pinus taeda L.) individuals. Phenotypes of the 165 individuals were obtained from clonally replicated field trials and were used to estimate breeding values for growth (stem volume). Two alternative methods, based on allele frequencies or regression, were used to generate the genomic relationship matrices. The accuracies of genomic estimated breeding values based on the genomic relationship matrices and breeding values estimated based on the average numerator relationship matrix were compared. On average, the accuracy of predictions based on genomic relationships ranged between 0.37 and 0.74 depending on the validation method. We did not detect differences in the accuracy of predictions based on genomic relationship matrices estimated by two different methods. Using genomic relationship matrices allowed modeling of Mendelian segregation within full-sib families, an important advantage over a traditional genetic evaluation system based on pedigree. We conclude that estimation of genomic relationships could be a powerful tool in forest tree breeding because it accurately accounts both for genetic relationships among individuals and for nuisance effects such as location and replicate effects, and makes more accurate selection possible within full-sib crosses.

No abstract

No abstract

Using a combination of model simulations and detailed measurements at a hierarchy of scales conducted at a sandhills forest site, the effect of fertilization on net ecosystem exchange ( NEE ) and its components in 6-year-old Pinus taeda stands was quantified. The detailed measurements, collected over a 20-d period in September and October, included gas exchange and eddy covariance fluxes, sampled for a 10-d period each at the fertilized stand and at the control stand. Respiration from the forest floor and aboveground biomass was measured using chambers during the experiment. Fertilization doubled leaf area index (LAI) and increased leaf carboxylation capacity by 20%. However, this increase in total LAI translated into an increase of only 25% in modelled sunlit LAI and in canopy photosynthesis. It is shown that the same climatic and environmental conditions that enhance photosynthesis in the September and October periods also cause an increase in respiration The increases in respiration counterbalanced photosynthesis and resulted in negligible NEE differences between fertilized and control stands. The fact that total biomass of the fertilized stand exceeded 2·5 times that of the control, suggests that the counteracting effects cannot persist throughout the year. In fact, modelled annual carbon balance showed that gross primary productivity ( GPP ) increased by about 50% and that the largest enhancement in NEE occurred in the spring and autumn, during which cooler temperatures reduced respiration more than photosynthesis. The modelled difference in annual NEE between fertilized and control stands (approximately 200 g C m − − − − 2 y − − − − 1 ) suggest that the effect of fertilization was sufficiently large to transform the stand from a net terrestrial carbon source to a net sink.

Your article is protected by copyright and all rights are held exclusively by Springer-Verlag. This e-offprint is for personal use only and shall not be self-archived in electronic repositories. If you wish to self-archive your work, please use the accepted author's version for posting to your own website or your institution's repository. You may further deposit the accepted author's version on a funder's repository at a funder's request, provided it is not made publicly available until 12 months after publication.

No abstract

Abstract:In southern pines of the United States, resistance to attack by southern pine beetle, Dendroctonus frontalis Zimmermann, is believed to principally involve flow of oleoresin to beetle attack sites. Both environmental and genetic factors are known to affect the quantity of oleoresin flow in loblolly pine, Pinus taeda L., but little is known about the genetic contribution to phenotypic variation in this trait. Here we report estimates of genetic variation in oleoresin flow and growth traits for a population of this species. Oleoresin yield, total height, and diameter were measured on 10-and 11-year-old trees from an experimental test in Santa Rosa County, Florida. Trees were from 72 full-sib families produced by mating 48 parents according to a disconnected partial diallel mating design. Resin yield was determined from breast-height samples collected at two times: once in the summer of 1999 when latewood was being produced (summer resin flow), and once in the spring of 2000 during earlywood formation (spring resin flow). All traits studied were found to be highly genetically variable and to have much greater additive than dominance variance. Estimates of narrow-sense heritability for spring and summer resin flow were in the moderate range and are comparable to values obtained for the growth traits. Additive genetic correlations between oleoresin yield and the growth traits were positive and moderately high, suggesting that directional selection to improve growth in loblolly pine will also result in increased production of oleoresin.

To assess the contribution of belowground biomass allocation towards total carbon (C) allocation of two provenances of loblolly pine (Pinus taeda L.), we examined the total biomass allocation of a fast- and slow-growing family from each provenance. Since planting on a xeric, infertile site in Scotland County, N.C., U.S.A., trees in this study have been subjected to one of two nutrient treatments: optimal nutrition or control (no fertilization). Total biomass of 24 (1 tree/family plot × 2 families × 2 provenances × 2 treatments × 3 blocks) 5-year-old (juvenile) trees was harvested in January 1998. Fertilization increased total root, total shoot, and total tree biomass in all families as compared with harvested trees in control plots. Fertilization also increased biomass of coarse-root, woody-root, taproot, stem, branch, and foliar components of families as compared with trees in control plots. Although there were treatment and family differences in standing-crop biomass of the total root, total shoot, total tree, and various individual root and shoot components, the percent biomass (whole-tree) allocation to these tissues remained similar across treatments. Total nonstructural carbohydrate (TNC) analysis indicated some treatment, family, and provenance differences in TNC concentrations and partitioning to starch and soluble sugars. At the time of harvest, TNC concentrations of belowground tissues were much higher than those of aboveground tissues, and enhanced partitioning towards starch in root tissues indicates an important C storage role for belowground tissues at this time. Indeed, more than 90% of the trees starch content was present in root tissue in January. Although constrained by a sample size of three harvested trees per family, this study suggests that biomass allocation on a whole-tree level was similar between fast- and slow-growing families of different provenances of juvenile loblolly pine and was not affected by fertilizer treatment.