Infectious diseases can cause population declines and even extinctions. The amphibian chytrid fungus, Batrachochytrium dendrobatidis (Bd), has caused population declines and extinctions in amphibians on most continents. In the tropics, research on the dynamics of this disease has focused on amphibian populations in mountainous areas. In most of these areas, high and low elevation sites are connected by an assemblage of streams that may transport the infectious stage of the pathogen from high to low elevations, and, also, this pathogen, which grows well at cool temperatures, may persist better in cooler water flowing from high elevations. Thus, the dynamics of disease at low elevation sites without aquatic connections to higher elevation sites, i.e., non-contiguous low elevation sites, may differ from dynamics at contiguous low elevation sites. We sampled adult common mistfrogs (Litoria rheocola) at six sites of three types: two at high (> 400m) elevations, two at low elevations contiguous with high elevation streams, and two at low elevations non-contiguous with any high elevation site. Adults were swabbed for Bd diagnosis from June 2010 to June 2011 in each season, over a total of five sampling periods. The prevalence of Bd fluctuated seasonally and was highest in winter across all site types. Site type significantly affected seasonal patterns of prevalence of Bd. Prevalence remained well above zero throughout the year at the high elevation sites. Prevalence declined to lower levels in contiguous low sites, and reached near-zero at non-contiguous low sites. Patterns of air temperature fluctuation were very similar at both the low elevation site types, suggesting that differences in water connectivity to high sites may have affected the seasonal dynamics of Bd prevalence between contiguous and non-contiguous low elevation site types. Our results also suggest that reservoir hosts may be important in the persistence of disease at low elevations.

1. Biological invasions are a major driver of ecosystem change but causes of variation in their environmental impacts over space and time remain poorly understood. Most approaches used to quantify the impacts of non-native species assume there are interactions among per capita (i.e. individual level) effects, species abundance and the area occupied by the species. However, studies rarely evaluate these factors and their interactions and often fail to recognize that the magnitude of impacts can be highly context dependent. Understanding what drives the context dependence of non-native species impacts can improve our understanding and predictions of ecosystem change and better inform options for mitigation.2. Conifers, especially pines, are among the most problematic non-native plant species globally. We use Pinaceae to illustrate how context dependence in biodiversity and environmental impacts of non-native plant species can be generated by at least four processes: nonlinear density effects; intraspecific variation in functional traits; shifts in impacts over time; and persistence of impacts as biological or ecosystem legacies following non-native species removal. Using this understanding, we develop a framework to better quantify interactions of impacts along environmental gradients (e.g. soil fertility, climate, ecosystem age).3. We demonstrate how impacts of non-native species can occur at both low and high density, and that failing to account for intraspecific variation in effect traits can lead to significant errors in the prediction of impacts. By incorporating context dependence in regard to density and functional traits, we can measure how the interaction of this context dependence will shift along environmental gradients. | 945Functional Ecology SAPSFORD et Al.

Natural disturbances can drive disease dynamics in animal populations by altering the microclimates experienced by hosts and their pathogens. Many pathogens are highly sensitive to temperature and moisture, and therefore small changes in habitat structure can alter the microclimate in ways that increase or decrease infection prevalence and intensity in host populations. Here we show that a reduction of rainforest canopy cover caused by a severe tropical cyclone decreased the risk of endangered rainforest frogs (Litoria rheocola) becoming infected by a fungal pathogen (Batrachochytrium dendrobatidis). Reductions in canopy cover increased the temperatures and rates of evaporative water loss in frog microhabitats, which reduced B. dendrobatidis infection risk in frogs by an average of 11–28% in cyclone-damaged areas, relative to unaffected areas. Natural disturbances to the rainforest canopy can therefore provide an immediate benefit to frogs by altering the microclimate in ways that reduce infection risk. This could increase host survival and reduce the probability of epidemic disease outbreaks. For amphibian populations under immediate threat from this pathogen, targeted manipulation of canopy cover could increase the availability of warmer, drier microclimates and therefore tip the balance from host extinction to coexistence.

To minimize the negative effects of an infection on fitness, hosts can respond adaptively by altering their reproductive effort or by adjusting their timing of reproduction. We studied effects of the pathogenic fungus Batrachochytrium dendrobatidis on the probability of calling in a stream-breeding rainforest frog (Litoria rheocola). In uninfected frogs, calling probability was relatively constant across seasons and body conditions, but in infected frogs, calling probability differed among seasons (lowest in winter, highest in summer) and was strongly and positively related to body condition. Infected frogs in poor condition were up to 40% less likely to call than uninfected frogs, whereas infected frogs in good condition were up to 30% more likely to call than uninfected frogs. Our results suggest that frogs employed a pre-existing, plastic, life-history strategy in response to infection, which may have complex evolutionary implications. If infected males in good condition reproduce at rates equal to or greater than those of uninfected males, selection on factors affecting disease susceptibility may be minimal. However, because reproductive effort in infected males is positively related to body condition, there may be selection on mechanisms that limit the negative effects of infections on hosts.

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Background Plants condition the soil in which they grow, thereby altering the performance of subsequent plants growing in this soil. This phenomenon, known as plant-soil feedback (PSF), has garnered increasing interest. Experiments are moving from single species soil pairings in the glasshouse to community-level field trials. Consequently, our knowledge of the role PSF plays in shaping ecosystem functions has advanced. However, knowledge gaps remain. Scope Here, we explore intrinsic and extrinsic abiotic and biotic drivers of PSF such as maternal effects, plant functional traits, self-DNA, plant-plant competition, herbivory, interactions between soil organisms, temperature, drought, flooding, greenhouse gases, (micro)nutrients, plant-litter-soil feedback and priority effects. These drivers have begun to feature in experiments, thereby increasing our mechanistic understanding of PSF. Nonetheless, many of these topics have received insufficient coverage to determine general principles across larger temporal and spatial scales. Further, conflicting terminology has excluded PSF studies from reviews and meta-analyses. We review terms such as soil sickness, Janzen-Connell hypothesis, soil-related invasive species work, soil legacies, allelopathy and soil-related succession that overlap with PSF but are generally not named as such. Conclusion Holistic experimental designs that consider the continual reciprocal feedback between the extrinsic environment, plants and soil, as well as the unification of terminologies are necessary if we are to realise the full potential of PSF for understanding and steering ecosystem processes. Here, we compile outstanding questions related to PSF research that emphasis the aforementioned topics and suggest ways to incorporate them into future research in order to advance plant-soil ecology.