Atmospheric electric fields, connected with the ionization of particles and plasma processes, occur in the fields of pressure gradients of mosaic mesh topology. Atmospheric aerosol particles play a significant role in the vortex generation. The Coriolis force and the motion of charged particles in the geomagnetic field lead to gyrotropy of the atmosphere and ionosphere. Occurrence of plasma vortices is stochastically determined for such an inhomogeneous gyrotropic medium. The geomagnetic field influences the change of structures of inhomogeneous media in the process of excitation of plasma vortices and their interaction. If colliding vortices are centered on the one geomagnetic line, the merge of vortices and the generation of a joint powerful vortex are possible. If a collision of vortices with centers at different geomagnetic field lines occurs, then the emergence of areas of heating and jet streams and the generation of new vortices are possible.
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