Like a discovery game that requires players to earn the right to take on new challenges, Immune Attack compels its players to learn the rules of the immune system before it reveals deeper biological insight.
Classifying acoustic units is often a key step in studying repertoires and sequence structure in animal communication. Manual classification by eye and ear remains the primary method, but new tools and techniques are urgently needed to expedite the process for large, diverse datasets. Here we introduce Koe, an application for classifying and analysing animal vocalizations. Koe offers bulk‐labelling of units via interactive ordination plots and unit tables, as well as visualization and playback, segmentation, measurement, data filtering/exporting and new tools for analysing repertoire and sequence structure – in an integrated environment. We demonstrate Koe with a real‐world case study of New Zealand bellbird Anthornis melanura songs from an archipelago metapopulation. Having classified 21,500 units in Koe, we compare repertoires and sequence structure between sites and sexes. Koe is web‐based ( koe.io.ac.nz.) and easy to use, making it ideal for collaboration, education and citizen science. By enabling large‐scale, high‐resolution classification and analysis of animal vocalizations, Koe expands the possibilities for bioacoustics research.
Bird song is commonly regarded as a male trait that has evolved through sexual selection. However, recent research has prompted a re-evaluation of this view by demonstrating that female song is an ancestral and phylogenetically widespread trait. Species with female song provide opportunities to study selective pressures and mechanisms specific to females within the wider context of social competition. We investigated the relationship between reproductive success and female song performance in the New Zealand bellbird (Anthornis melanura), a passerine resident year round in New Zealand temperate forests. We monitored breeding behavior and song over 3 years on Tiritiri Matangi Island. Female bellbirds contributed significantly more toward parental care than males (solely incubating young and provisioning chicks at more than twice the rate of males). Female song rate in the vicinity of the nest was higher than that of males during incubation and chick-rearing stages but similar during early-nesting and post-breeding stages. Using GLMs, we found that female song rates during both incubation and chick-rearing stages strongly predicted the number of fledged chicks. However, male song rate and male and female chick provisioning rates had no effect on fledging success. Two measures of female song complexity (number of syllable types and the number of transitions between different syllable types) were also good predictors of breeding success (GLM on PC scores). In contrast, song duration, the total number of syllables, and the number of "stutter" syllables per song were not correlated with fledging success. It is unclear why male song rate was not associated with reproductive success and we speculate that extra-pair paternity might play a role. While we have previously demonstrated that female bellbird song is important in intrasexual interactions, we clearly demonstrate here that female song predicts reproductive success. These results, with others, highlight the need for a change in how we view the significance of female secondary sexual traits; traits long underestimated due to a focus on male song.
Songbirds learn their songs culturally, through imitating tutors. The vocal culture of a songbird population changes as new song units (syllables) are introduced through immigration, copying errors, and innovation, while other syllables fall out of use. This leads to a diversification of the syllable pool across the species, much like the diversification and spatial patterns of human language. Vocal cultures have been well studied in male songbirds but have been largely overlooked in females. In particular, few studies compare spatial variation of male and female song cultures. Here we undertake one of the first comparisons of male and female song culture in birds, analysing song data from a metapopulation of New Zealand bellbirds Anthornis melanura, spanning an archipelago of six islands. Having classified 20,700 syllables, we compare population syllable repertoire sizes and overlap between sites and sexes. We show that males and females - both with complex songs - have distinct song cultures, sharing only 6-26% of syllable types within each site. Furthermore, male and female syllable types can be statistically discriminated based on acoustic properties. Despite diverse syllable repertoires within sites, very few syllable types were shared between sites (both sexes had highly distinct site-specific dialects). For the few types shared between sites, sharing decreased with distance only for males. Overall, there was no significant difference between sexes in degree of site-site repertoire overlap. These results show different cultural processes at play for the two sexes. We discuss the implications for future research on female culture.
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