Gephi is a network visualization software used in various disciplines (social network analysis, biology, genomics…). One of its key features is the ability to display the spatialization process, aiming at transforming the network into a map, and ForceAtlas2 is its default layout algorithm. The latter is developed by the Gephi team as an all-around solution to Gephi users’ typical networks (scale-free, 10 to 10,000 nodes). We present here for the first time its functioning and settings. ForceAtlas2 is a force-directed layout close to other algorithms used for network spatialization. We do not claim a theoretical advance but an attempt to integrate different techniques such as the Barnes Hut simulation, degree-dependent repulsive force, and local and global adaptive temperatures. It is designed for the Gephi user experience (it is a continuous algorithm), and we explain which constraints it implies. The algorithm benefits from much feedback and is developed in order to provide many possibilities through its settings. We lay out its complete functioning for the users who need a precise understanding of its behaviour, from the formulas to graphic illustration of the result. We propose a benchmark for our compromise between performance and quality. We also explain why we integrated its various features and discuss our design choices.
Gephi is an open source software for graph and network analysis. It uses a 3D render engine to display large networks in real-time and to speed up the exploration. A flexible and multi-task architecture brings new possibilities to work with complex data sets and produce valuable visual results. We present several key features of Gephi in the context of interactive exploration and interpretation of networks. It provides easy and broad access to network data and allows for spatializing, filtering, navigating, manipulating and clustering. Finally, by presenting dynamic features of Gephi, we highlight key aspects of dynamic network visualization.
The identification of nodes occupying important positions in a network structure is crucial for the understanding of the associated real-world system. Usually, betweenness centrality (BC) is used to evaluate a node capacity to connect different graph regions. However, we argue here that this measure is not adapted for that task, as it gives equal weight to 'local' centres (i.e. nodes of high-degree central to a single region) and to 'global' bridges, which connect different communities. This distinction is important as the roles of such nodes are different in terms of the local and global organization of the network structure. In this paper, we propose a decomposition of BC into two terms, one highlighting the local contributions and the other the global ones. We call the latter bridgeness centrality and show that it is capable to specifically spot out global bridges. In addition, we introduce an effective algorithmic implementation of this measure and demonstrate its capability to identify global bridges in air transportation and scientific collaboration networks.
International audienceIn this article, we present a few lessons we learnt in the establishment of the Sciences Po médialab. As an interdisciplinary laboratory associating social scientists, code developers and information designers, the médialab is not one of a kind. In the last years, several of such initiatives have been established around the world to harness the potential of digital technologies for the study of collective life. If we narrate this particular story, it is because, having lived it from the inside, we can provide an intimate account of the surprises and displacements of digital research. Founding the médialab in 2009, we knew that we were leaving the reassuring traditions of social sciences to venture in the unexplored territory of digital inscriptions. What we couldn't foresee was how much such encounter would change our research. Buying into gospel of Big Data, we imagined that the main novelty of digital research came from handling larger amounts of data. We soon realized that the interest of digital inscriptions comes instead from their proliferating diversity. Such diversity encouraged us to reshape our professional alliances, research practices and theoretical perspectives. It also led us to overcome several of the oppositions that used to characterize social sciences (qualitative/quantitative, situation/aggregation, micro/ macro, local/global) and to move in the direction of a more continuous sociology
It is increasingly common in natural and social sciences to rely on network visualizations to explore relational datasets and illustrate findings. Such practices have been around long enough to prove that scholars find it useful to project networks in a two-dimensional space and to use their visual qualities as proxies for their topological features. Yet these practices remain based on intuition, and the foundations and limits of this type of exploration are still implicit. To fill this lack of formalization, this paper offers explicit documentation for the kind of visual network analysis encouraged by force-directed layouts. Using the example of a network of Jazz performers, band and record labels extracted from Wikipedia, the paper provides guidelines on how to make networks readable and how to interpret their visual features. It discusses how the inherent ambiguity of network visualizations can be exploited for exploratory data analysis. Acknowledging that vagueness is a feature of many relational datasets in the humanities and social sciences, the paper contends that visual ambiguity, if properly interpreted, can be an asset for the analysis. Finally, we propose two attempts to distinguish the ambiguity inherited from the represented phenomenon from the distortions coming from fitting a multidimensional object in a two-dimensional space. We discuss why these attempts are only partially successful, and we propose further steps towards a metric of spatialization quality.
Networks are classic but under-acknowledged figures of journalistic storytelling. Who is connected to whom and by which means? Which organizations receive support from which others? What resources or information circulate through which channels and which intermediaries enable and regulate their flows? These are all customary stories and lines of inquiry in journalism and they all have to do with networks. Additionally, the recent spread of digital media has increasingly confronted journalists with information coming not only in the traditional form of statistic tables, but also of relational databases. Yet, journalists have so far made little use of the analytical resources offered by networks. To address this problem in this chapter we examine how "visual network exploration" may be brought to bear in the context of data journalism in order to explore, narrate and make sense of large and complex relational datasets. We borrow the more familiar vocabulary of geographical maps to show how key graphical variables such as position, size and hue can be used to interpret and characterise graph structures and properties. We illustrate this technique by taking as a starting point a recent example from journalism, namely a catalogue of French information sources compiled by Le Monde's The Decodex. We establish that good visual exploration of networks is an iterative process where practices to demarcate categories and territories are entangled and mutually constitutive. To enrich investigation we suggest ways in which the insights of the visual exploration of networks can be supplemented with simple calculations and statistics of distributions of nodes and links across the network. We conclude with reflection on the knowledge-making capacities of this technique and how these compare to the insights and instruments that journalists have used in the Decodex projectsuggesting that visual network exploration is a fertile area for further exploration and collaborations between data journalists and digital researchers.
Networks have become the de facto diagram of the Big Data age (try searching Google Images for [big data AND visualisation] and see). The concept of networks has become central to many fields of human inquiry and is said to revolutionise everything from medicine to markets to military intelligence. While the mathematical and analytical capabilities of networks have been extensively studied over the years, in this article we argue that the storytelling affordances of networks have been comparatively neglected. In order to address this we use multimodal analysis to examine the stories that networks evoke in a series of journalism articles. We develop a protocol by means of which narrative meanings can be construed from network imagery and the context in which it is embedded, and discuss five different kinds of narrative readings of networks, illustrated with analyses of examples from journalism. Finally, to support further research in this area, we discuss methodological issues that we encountered and suggest directions for future study to advance and broaden research around this defining aspect of visual culture after the digital turn.
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