No abstract

Transgenic glyphosate-resistant (GR) soybean [Glycine max (L.) Merr.] has enabled highly effective and economical weed control. The concomitant increased application of glyphosate could lead to shifts in the soil microbial community. The objective of these experiments was to evaluate the effects of glyphosate on soil microbial community structure, function and activity. Field assessments on soil microbial communities were conducted on a silt loam soil near Stoneville, MS, USA. Surface soil was collected at time of planting, before initial glyphosate application and 14 days after two post-emergence glyphosate applications. Microbial community fatty acid methyl esters (FAMEs) were analyzed from these soil samples and soybean rhizospheres. Principal component analysis of the total FAME profile revealed no differentiation between field treatments, although the relative abundance of several individual fatty acids differed significantly. There was no significant herbicide effect in bulk soil or rhizosphere soils. Collectively, these findings indicate that glyphosate caused no meaningful whole microbial community shifts in this time period, even when applied at greater than label rates. Laboratory experiments, including up to threefold label rates of glyphosate, resulted in up to a 19% reduction in soil hydrolytic activity and small, brief (<7 days) changes in the soil microbial community. After incubation for 42 days, 32-37% of the applied glyphosate was mineralized when applied at threefold field rates, with about 9% forming bound residues. These results indicate that glyphosate has only small and transient effects on the soil microbial community, even when applied at greater than field rates.

Most well-drained Mississippi Delta soils have been used for cotton production, but corn has recently become a desirable alternative crop, and subsequently, atrazine use has increased. Between 2000 and 2001, 21 surface soils (0 to 5 cm depth) with known management histories were collected from various sites in Leflore, Sunflower, and Washington counties of Mississippi. Atrazine degradation was assessed in 30-d laboratory studies using 14C-ring–labeled herbicide. Mineralization was extensive in all soils with a history of one to three atrazine applications with cumulative mineralization over 30 d ranging from 45 to 72%. In contrast, cumulative mineralization of atrazine from three soils with no atrazine history was only 5 to 10%. However, one soil with no history of atrazine application mineralized 54 and 29% of the atrazine in soils collected in 2000 and 2001, respectively. Methanol extracted 15 to 23% of the 14C-atrazine 7 d after treatment in soils having two applications within the past 6 yr, whereas 65 to 70% was extracted from no-history soils. First-order kinetic models indicated soil with 2 yr of atrazine exposure exhibited a half-life of less than 6 d. Most probable number (MPN) estimates of atrazine-ring mineralizing-microorganisms ranged from 450 to 7,200 propagules g−1 in atrazine-exposed soils, and none were detected in soils with no history of atrazine use. Although most soils exhibited rapid atrazine mineralization, analysis of DNA isolated from these soils by direct or nested polymerase chain reaction (PCR) failed to amplify DNA sequences with primers for the atzA atrazine chlorohydrolase gene. These results indicate that microbial populations capable of accelerated atrazine degradation have developed in Mississippi Delta soils. This may reduce the weed control efficacy of atrazine but also reduce the potential for off-site movement. Studies are continuing to identify the genetic basis of atrazine degradation in these soils.

This study compared cultural and analytical methods for detecting aflatoxin production by Aspergillus species. Aspergillus isolates were obtained from various Mississippi Delta crops (corn, peanut, rice, cotton) and soils. Most of the isolates (99%) were A. flavus and the remainder comprised A. parasiticus and A. nomius. The following three cultural methods were evaluated on potato dextrose agar: fluorescence (FL) on beta-cyclodextrin-containing media (CD), yellow pigment (YP) formation in mycelium and medium, and color change after ammonium hydroxide vapor exposure (AV). Aflatoxins in culture extracts were confirmed by thin-layer chromatography (TLC) and quantified by enzyme-linked immunosorbent assay (ELISA). Of the 517 isolates, 314 produced greater than 20 ng/g of total aflatoxin based on ELISA, and 180 produced greater than 10 000 ng/g of aflatoxin in the medium. Almost all the toxigenic isolates (97%) were confirmed by TLC as producers. Of the toxigenic isolates, as determined by ELISA, 93%, 73%, and 70% gave positive FL, YP, and AV responses, respectively. Of the 203 isolates producing less than 20 ng/g of aflatoxin, 20%, 6%, and 0% of respective FL, YP, and AV methods gave false-positive responses. The 9% false-positive results from TLC fall within this range. This study showed good agreement among all tested cultural methods. However, these cultural techniques did not detect aflatoxin in all cultures that were found to produce aflatoxins by ELISA, LC/MS, and TLC. The best results were obtained when the AV color change and CD fluorescence methods were used together, yielding an overall success rate comparable to TLC but without the need for chemical extraction and the time and expense of TLC.

Mississippi Delta cotton (Gossypium hirsutum L.) production in rotation with corn (Zea mays L.) was evaluated in field experiments from 2000 to 2005 at Stoneville, Mississippi. Plots maintained under minimum tillage were established in 2000 on a Dundee silt loam with treatments including continuous cotton or corn and alternate cotton-corn rotations. Mineralization and dissipation of 14C [ring]-labeled atrazine were evaluated in the laboratory on soils collected prior to herbicide application in the first, second, third, and sixth years of the study. In soils collected in 2000, a maximum of 10% of the atrazine was mineralized after 30 days. After 1 year of herbicide application, atrazine-treated soils mineralized 52-57% of the radiolabeled atrazine in 30 days. By the sixth year of the study, greater than 59% of the atrazine was mineralized after 7 days in soils treated with atrazine, while soils from plots with no atrazine treatment mineralized less than 36%. The data also indicated rapid development of enhanced atrazine degradation in soils following 1 year of corn production with atrazine use. Atrazine mineralization was as rapid in soils under a rotation receiving biannual atrazine applications as in soils under continuous corn receiving annual applications of atrazine. Cumulative mineralization kinetics parameters derived from the Gompertz model (k and ti) were highly correlated with a history of atrazine application and total soil carbon content. Changes in the soil microbial community assessed by total fatty acid methyl ester (FAME) analysis indicated significant interactions of cropping system and sampling date, with FAME indicators for soil bacteria responsible for differences in community structure. Autoclaved soil lost all ability to mineralize atrazine, and atrazine-mineralizing bacteria were isolated from these plots, confirming the biological basis for atrazine mineralization. These results indicate that changes in degradative potential of a soil can occur rapidly and some changes in soil properties may be associated with cropping systems, which can contribute to enhanced atrazine degradation potential.