Decamer RAPD primers were tested on dioeceious and hermaphrodite plants of Commiphora wightii to identify sex-specific molecular markers. Sixty different random decamer primers were screened out of which only three primers were found to be associated with sex expression. A *1,280-bp fragment from the primer OPN06 was found to be present in all the female individuals. Another primer OPN 16 produced a unique *400-bp amplification product in only hermaphrodite individuals. The third marker, OPA20 amplified a *1,140-bp fragment from female and hermaphrodite DNAs, but failed to do so from the male plant DNAs.
Cymbopogon is an important genus of family Poaceae, cultivated mainly for its essential oils which possess high medicinal and economical value. Several cultivars of Cymbopogon species are available for commercial cultivation in India and identification of these cultivars was conceded by means of morphological markers and essential oil constitution. Since these parameters are highly influenced by environmental factors, in most of the cases, it is difficult to identify Cymbopogon cultivars. In the present study, Random amplified polymorphic DNA (RAPD) and Inter-simple sequence repeat (ISSR) markers were employed to discriminate nine leading varieties of Cymbopogon since prior genomic information is lacking or very little in the genus. Ninety RAPD and 70 ISSR primers were used which generated 63 and 69 % polymorphic amplicons, respectively. Similarity in the pattern of UPGMA-derived dendrogram of RAPD and ISSR analysis revealed the reliability of the markers chosen for the study. Varietal/cultivar-specific markers generated from the study could be utilised for varietal/cultivar authentication, thus monitoring the quality of the essential oil production in Cymbopogon. These markers can also be utilised for the IPR protection of the cultivars. Moreover, the study provides molecular marker tool kit in both random and simple sequence repeats for diverse molecular research in the same or related genera.
Antioxidant enzymes can contribute to disease susceptibility or determine response to therapy in individuals with malaria. Genetic variations due to polymorphisms in host genes encoding antioxidant enzymes such as glutathione S-transferases-theta, mu, pi (GSTT, GSTM, GSTP), superoxide dismutases (SOD) and catalase (CAT), may therefore, influence inter-individual response to malaria pathology and propensity of infection caused by Plasmodium vivax (Pv) and Plasmodium falciparum (Pf). Therefore, using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) and DNA sequencing, we investigated the association of deletions of GSTT1 and GSTM1, single nucleotide polymorphisms (SNPs) of GSTP1 (rs1695), SOD1 (rs2234694), SOD2 (rs4880, rs1141718), SOD3 (rs2536512) and CAT (rs1001179) in individuals infected with Pf (n = 100) and Pv (n = 100) against healthy controls (n = 150). Our data suggest a significant role for GSTM1 deletions in complicated Pv (p = 0.0007) malaria with ODDs ratio 3.8 [with 95 % confidence interval (CI) 1.9-7.4]. The results also indicated that polymorphisms present in GSTP1, SOD1 and CAT genes may be associated with malaria susceptibility (p < 0.05), whereas SOD3 polymorphism may play a role in malarial resistance (p < 0.05). In addition, we observed significant SNP-SNP interactions with synergistic genetic effects in SOD2, SOD3 and CAT genes for Pv and in SOD2 and SOD3 genes for Pf. In conclusion, our results provide convincing evidence for a relationship between polymorphisms in host antioxidant enzymes and susceptibility to malaria infection.
Chlorophytum borivilianum is an important medicinal plant known as ‘Safed musli’, used in many Ayurvedic vital tonics and aphrodisiac formulations. The species was first described from India in 1954 and reached rare status in nature due to overexploitation. Owing to its increased demand, the species has attracted the attention of farmers as well as researchers in several institutions. The present paper deals with various research aspects such as conservation biology, cytology, chemistry, plant genetic resources, micropropagation, crop management, etc. conducted on the crop for the last two decades in India. The species is diploid 2n=4x=28 and is mainly vegetatively propagated. Seeds remain dormant for nearly 10 months and also suffer from poor germination. Fleshy roots of the species contain saponins having therapeutic value. Germplasm collections made from different states in India show the occurrence of wide genetic variability in terms of plant type, maturity period, growth and yield characters, and size and shape of fleshy roots. Although the species is cross-pollinated in nature, self-pollination is also feasible artificially. One high-yielding cultivar and two high-yielding morphotypes have been recently identified. A micropropagation protocol using different explants has been standardized and agrotechnology for cultivation developed. Successful use of synthetic seed has also been reported. The article presents a comprehensive overview of the current state of research in the species with due emphasis on future thrust and possibilities.
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