Functional magnetic resonance imaging (fMRI) is a standard tool to investigate the neural correlates of cognition. fMRI noninvasively measures brain activity, allowing identification of patterns evoked by tasks performed during scanning. Despite the long history of this technique, the idiosyncrasies of each dataset have led to the use of ad-hoc preprocessing protocols customized for nearly every different study. This approach is time-consuming, error-prone, and unsuitable for combining datasets from many sources. Here we showcase fMRIPrep ( http://fmriprep.org ), a robust tool to prepare human fMRI data for statistical analysis. This software instrument addresses the reproducibility concerns of the established protocols for fMRI preprocessing. By leveraging the Brain Imaging Data Structure (BIDS) to standardize both the input datasets -MRI data as stored by the scanner-and the outputs -data ready for modeling and analysis-, fMRIPrep is capable of preprocessing a diversity of datasets without manual intervention. In support of the growing popularity of fMRIPrep , this protocol describes how to integrate the tool in a task-based fMRI investigation workflow.
How do people decide whether to try out novel options as opposed to tried-and-tested ones? We argue that they infer a novel option's reward from contextual information learned from functional relations and take uncertainty into account when making a decision. We propose a Bayesian optimization model to describe their learning and decision making. This model relies on similarity-based learning of functional relationships between features and rewards, and a choice rule that balances exploration and exploitation by combining predicted rewards and the uncertainty of these predictions. Our model makes two main predictions. First, decision makers who learn functional relationships will generalize based on the learned reward function, choosing novel options only if their predicted reward is high. Second, they will take uncertainty about the function into account, and prefer novel options that can reduce this uncertainty. We test these predictions in three preregistered experiments in which we examine participants' preferences for novel options using a feature-based multi-armed bandit task in which rewards are a noisy function of observable features. Our results reveal strong evidence for functional exploration and moderate evidence for uncertainty-guided exploration. However, whether or not participants chose a novel option also depended on their attention, as well as reflecting on the value of the options. These results advance our understanding of people's reactions in the face of novelty.
Functional magnetic resonance imaging (fMRI) is widely used to investigate the neural correlates of cognition. fMRI non-invasively measures brain activity, allowing identification of patterns evoked by tasks performed during scanning. Despite the long history of this technique, the idiosyncrasies of each dataset have led to the use of ad-hoc preprocessing protocols customized for nearly every different study. This approach is time-consuming, error-prone, and unsuitable for combining datasets from many sources. Here we showcase fMRIPrep , a robust preprocessing tool for virtually any human BOLD (blood-oxygen level dependent) fMRI dataset that addresses the reproducibility concerns of the established protocols for fMRI preprocessing. Based on standardizations of the input and output data specifications, fMRIPrep is capable of preprocessing a diversity of datasets without manual intervention. In support of the growing popularity of fMRIPrep , this protocol describes how to integrate the tool in a task-based fMRI investigation workflow.
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