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We used a 5 year time series of transport, temperature, and salinity from moorings at the head of Barrow Canyon to describe seasonal variations and construct a 37 year transport hindcast. The latter was developed from summer/winter regressions of transport against Bering‐Chukchi winds. Seasonally, the regressions differ due to baroclinicity, stratification, spatial, and seasonal variations in winds and/or the surface drag coefficients. The climatological annual cycle consists of summer downcanyon (positive and toward the Arctic Ocean) transport of ∼0.45 Sv of warm, freshwaters; fall (October–December) upcanyon transport of ∼−0.1 Sv of cooler, saltier waters; and negligible net winter (January–April) mass transport when shelf waters are saline and near‐freezing. Fall upcanyon transports may modulate shelf freezeup, and negligible winter transports could influence winter water properties. Transport variability is largest in fall and winter. Daily transport probability density functions are negatively skewed in all seasons and seasonal variations in kurtosis are a function of transport event durations. The latter may have consequences for shelf‐basin exchanges. The climatology implies that the Chukchi shelf circulation reorganizes annually: in summer ∼40% of the summer Bering Strait inflow leaves the shelf via Barrow Canyon, but from fall through winter all of it exits via the western Chukchi or Central Channel. We estimate a mean transport of ∼0.2 Sv; ∼50% less than estimates at the mouth of the canyon. Transport discrepancies may be due to inflows from the Beaufort shelf and the Chukchi shelfbreak, with the latter entering the western side of the canyon.

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Palmer Deep canyon along the central West Antarctic Peninsula is known to have higher phytoplankton biomass than the surrounding non-canyon regions, but the circulation mechanisms that transport and locally concentrate phytoplankton and Antarctic krill, potentially increasing prey availability to upper-trophic-level predators such as penguins and cetaceans, are currently unknown. We deployed a three-site high-frequency radar network that provided hourly surface circulation maps over the Palmer Deep hotspot. A series of particle release experiments were used to estimate surface residence time and connectivity across the canyon. The majority of residence times fell between 1.0 and 3.5 days, with a mean of 2 days and a maximum of 5 days. We found a highly significant negative relationship between wind speed and residence time. Our residence time analysis indicates that the elevated phytoplankton biomass over the central canyon is transported into and out of the hotspot on time scales much shorter than the observed phytoplankton growth rate, suggesting that the canyon may not act as an incubator of phytoplankton productivity as previously suggested. It may instead serve more as a conveyor belt of phytoplankton biomass produced elsewhere, continually replenishing the phytoplankton biomass for the local Antarctic krill community, which in turn supports numerous top predators.This article is part of the theme issue ‘The marine system of the West Antarctic Peninsula: status and strategy for progress in a region of rapid change’.