Land use changes have been suggested as one of the causes for malaria epidemics in the African highlands. This study investigated the effects of deforestation-induced changes in indoor temperature on the survivorship and reproductive fitness of Anopheles gambiae in an epidemic prone area in the western Kenya highlands. We found that the mean indoor temperatures of houses located in the deforested area were 1.2 degrees C higher than in houses located in the forested area during the dry season and 0.7 degrees C higher during the rainy season. The mosquito mortality rate was highly age-dependent regardless of study site or season. Mosquitoes that were placed in houses in the deforested area showed a 64.8-79.5% higher fecundity than those in houses located in the forested area, but the median survival time was reduced by 5-7 days. Female mosquitoes in the deforested area showed a 38.5-40.6% increase in net reproductive rate and an 11.6-42.9% increase in intrinsic growth rate than those in the forested area. Significant increases in net reproductive rate and intrinsic growth rate for mosquitoes in the deforested area suggest that deforestation enhances mosquito reproductive fitness, increasing mosquito population growth potential in the western Kenya highlands. The vectorial capacity of An. gambiae under study was estimated at least 106% and 29% higher in the deforested area than in the forested area in dry and rainy seasons, respectively.

The paper evaluates three variants of the Gated Recurrent Unit (GRU) in recurrent neural networks (RNN) by reducing parameters in the update and reset gates. We evaluate the three variant GRU models on MNIST and IMDB datasets and show that these GRU-RNN variant models perform as well as the original GRU RNN model while reducing the computational expense.

Background Hypoendemic malaria transmission in western Kenya highlands is not expected to lead to rapid acquisition of immunity to malaria. However, the asymptomatic subpopulation may play a significant role as an infection reservoir that should be considered in malaria control programs. Determination of spatio-temporal dynamics of asymptomatic subpopulations provides an opportunity to estimate the epidemiological importance of this group to malaria transmission. Methods Monthly parasitological surveys were undertaken on a cohort of 246 children for 12 months. Plasmodium falciparum infection prevalence was analyzed by both microscopy and PCR, and infection durations were determined. Results Infection prevalence and duration (1–12 months) decreased with age and altitude. Prevalence among age groups 5–9 and 10–14 years was high (34.4% and 34.1%, respectively), but significantly lower in older children (9.1%). Prevalence decreased from (52.4%) at ~1,430 m to 23.3% at 1,580 m. Conclusions Prevalence of asymptomatic P. falciparum infections was high, with PCR detecting a significantly higher number of infections than microscopy. Our results are consistent with gradual acquisition of immunity with age upon repeated infection, and also show that malaria transmission risk is highly heterogeneous in the highland area. The results provide strong support for targeted control.

Malaria causes more than 300 million clinical cases and 665,000 deaths each year, and the majority of the mortality and morbidity occurs in sub-Saharan Africa. Due to the lack of effective vaccines and wide-spread resistance to antimalarial drugs, mosquito control is the primary method of malaria prevention and control. Currently, malaria vector control relies on the use of insecticides, primarily pyrethroids. The extensive use of insecticides has imposed strong selection pressures for resistance in the mosquito populations. Consequently, resistance to pyrethroids in Anopheles gambiae, the main malaria vector in sub-Saharan Africa, has become a major obstacle for malaria control. A key element of resistance management is the identification of resistance mechanisms and subsequent development of reliable resistance monitoring tools. Field-derived An. gambiae from Western Kenya were phenotyped as deltamethrin-resistant or -susceptible by the standard WHO tube test, and their expression profile compared by RNA-seq. Based on the current annotation of the An. gambiae genome, a total of 1,093 transcripts were detected as significantly differentially accumulated between deltamethrin-resistant and -susceptible mosquitoes. These transcripts are distributed over the entire genome, with a large number mapping in QTLs previously linked to pyrethorid resistance, and correspond to heat-shock proteins, metabolic and transport functions, signal transduction activities, cytoskeleton and others. The detected differences in transcript accumulation levels between resistant and susceptible mosquitoes reflect transcripts directly or indirectly correlated with pyrethroid resistance. RNA-seq data also were used to perform a de-novo Cufflinks assembly of the An. gambiae genome.

In high-elevation areas in western Kenya, the abundance of Anopheles arabiensis is either very low or absent. The western Kenya highlands (an area with an elevation > 1,500m above sea level) have also been experiencing extensive deforestation, and deforestation has been suggested as one of the important factors that facilitate malaria transmission in the highlands. This study investigated whether climate conditions in the western Kenya highlands (Kakamega, elevation 1,500 m above sea level) were permissive to the development and survival of An. arabiensis and whether deforestation promoted An. arabiensis survivorship of immature and adult stages, using life-table analysis. We found that in larval habitats located in forested areas, only 4-9% of first-instar larvae developed into adults and the development length exceeded 20 days. Mean water temperature of aquatic habitats in the deforested area was 4.8-6.1 degrees C higher than that in the forested area, larval-to-adult survivorship was increased to 65-82%, and larval-to-adult development time was shortened by 8-9 days. The average indoor temperature in houses in the deforested area was 1.7-1.8 degrees C higher than in the forested area, and the relative humidity was 22-25% lower. The median survival time of adult mosquitoes in the deforested area was 49-55% higher than those in the forested area. The net reproductive rate of female mosquitoes in the deforested area was 1.7- to 2.6-fold higher than that in the forested area. Compared with previously published data on An. gambiae, the net reproductive rate of An. arabiensis was only 0.8-1.3% of Anopheles gambiae in the forested area and 2.3-2.6% in the deforested area. Therefore, the current ambient climate condition is less permissive to An. arabiensis than to An. gambiae in western Kenya highlands. However, environmental changes such as deforestation and global warming may facilitate the establishment of An. arabiensis populations in the highlands.

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BackgroundThe effective measures for the control of malaria and filariasis vectors can be achieved by targeting immature stages of anopheline and culicine mosquitoes in productive habitat. To design this strategy, the mechanisms (like biotic interactions with conspecifc and heterospecific larvae) regulating mosquito aquatic stages survivorship, development time and the size of emerging adults should be understood. This study explored the effect of co-habitation between An. gambiae s.s. and Cx. quinquefasciatus on different life history traits of both species under different densities and constant food supply in the habitats of the same size under semi-natural conditions.MethodsExperiments were set up with three combinations; Cx. quinquefasciatus alone (single species treatment), An. gambiae s.s. alone (single species treatment); and An. gambiae s.s. with Cx. quiquefasciatus (co-habitation treatment) in different densities in semi field situation.ResultsThe effect of co-habitation of An. gambiae s.s. and Cx. quinquefasciatus was found to principally affect three parameters. The wing-lengths (a proxy measure of body size) of An. gambiae s.s. in co-habitation treatments were significantly shorter in both females and males than in An. gambiae s.s single species treatments. In Cx. quinquefasciatus, no significant differences in wing-length were observed between the single species and co-habitation treatments. Daily survival rates were not significantly different between co-habitation and single species treatments for both An. gambiae s.s. and Cx. quinquefasciatus. Developmental time was found to be significantly different with single species treatments developing better than co-habitation treatments. Sex ratio was found to be significantly different from the proportion of 0.5 among single and co-habitation treatments species at different densities. Single species treatments had more males than females emerging while in co-habitation treatments more females emerged than males. In this study, there was no significant competitive survival advantage in co-habitation.ConclusionThese results suggest that co-habitation of An. gambiae s.s. and Cx. quinquefasciatus in semi-natural conditions affect mostly An. gambiae s.s. body size. Hence, more has to be understood on the effects of co-habitation of An. gambiae s.s. and Cx. quinquefasciatus in a natural ecology and its possible consequences in malaria and filariasis epidemiology.