A Bayesian approach was developed by Hald et al.((1)) to estimate the contribution of different food sources to the burden of human salmonellosis in Denmark. This article describes the development of several modifications that can be used to adapt the model to different countries and pathogens. Our modified Hald model has several advantages over the original approach, which include the introduction of uncertainty in the estimates of source prevalence and an improved strategy for identifiability. We have applied our modified model to the two major food-borne zoonoses in New Zealand, namely, campylobacteriosis and salmonellosis. Major challenges were the data quality for salmonellosis and the inclusion of environmental sources of campylobacteriosis. We conclude that by modifying the Hald model we have improved its identifiability, made it more applicable to countries with less intensive surveillance, and feasible for other pathogens, in particular with respect to the inclusion of nonfood sources. The wider application and better understanding of this approach is of particular importance due to the value of the model for decision making and risk management.
The first‐order nonnegative integer valued autoregressive process has been applied to model the counts of events in consecutive points of time. It is known that, if the innovations are assumed to follow a Poisson distribution then the marginal model is also Poisson. This model may however not be suitable for overdispersed count data. One frequent manifestation of overdispersion is that the incidence of zero counts is greater than expected from a Poisson model. In this paper, we introduce a new stationary first‐order integer valued autoregressive process with zero inflated Poisson innovations. We derive some structural properties such as the mean, variance, marginal and joint distribution functions of the process. We consider estimation of the unknown parameters by conditional or approximate full maximum likelihood. We use simulation to study the limiting marginal distribution of the process and the performance of our fitting algorithms. Finally, we demonstrate the usefulness of the proposed model by analyzing some real time series on animal health laboratory submissions.
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