I. (2012). A molecular analysis of the evolutionary relationships in the Callitrichinae, with emphasis on the position of the dwarf marmoset. -Zoologica Scripta, 41, 1-10. The phylogenetic relationships among the Neotropical primates of the subfamily Callitrichinae (marmosets and tamarins) are controversial, especially with regard to the proposal of a new marmoset genus, Callibella, based on the analysis of sequences of a single mitochondrial gene. In this study, we combine the fast-evolving mitochondrial Control Region with four nuclear regions containing Alu elements in an attempt to provide a more conclusive assessment of the phylogenetic relationships among the marmosets (Callithrix, Cebuella and Mico), with special attention to the validity of Callibella. A large, representative sample of specimens was obtained, which include all the recognized genera and principal morphological and geographic groupings. The results of the analysis indicate unequivocally the existence of three independent lineages, corresponding to the Atlantic Forest (Callithrix), Amazonian (Mico) and pygmy marmoset (Cebuella) groups. The evidence also confirms the monophyletic relationship of the dwarf marmoset (Callibella) with the Amazonian marmosets (Mico), which indicates conclusively that this taxon is a member of the genus Mico, upholding the original description of the species as Mico humilis.
The phylogenetic analysis of the Chondrichthyes has been the subject of intense debate over the past two decades. The principal relationships within the group based on the analysis of morphological traits are inconsistent with the available molecular topologies, and the phylogeny of these animals is highly controversial, at all levels, ranging from superorders to families and even the genera within families. With the recent development of new generation sequencing (NGS), many phylogenies are now being inferred based on the complete genome of the species. In 2015 and 2016 alone, around 21 new elasmobranch genomes were made available in GenBank. In this context, the principal objective of the present study was to infer the phylogeny of the sharks and rays based on the complete mitochondrial genomes available in the literature. A total of 73 mitogenomes of chondrichthyan species were analyzed. The phylogenetic trees generated rejected the "Hypnosqualea" hypothesis and confirmed the monophyly of the Neoselachii and Batoidea as sister groups of the sharks. These mitogenomic analyses provided ampler and more complete insights into the relationships between the sharks and rays, in particular, the topologies obtained by the analyses revealed a number of incongruities in certain groups of sharks and rays, and the interrelationships between them.
The Amazonian coast has several unique geological characteristics resulting from the interaction between drainage pattern of the Amazon River and the Atlantic Ocean. It is one of the most extensive and sedimentologically dynamic regions of the world, with a large number of continental islands mostly formed less than 10,000 years ago. The natural distribution of the cane toad (Rhinella marina), one of the world’s most successful invasive species, in this complex Amazonian system provides an intriguing model for the investigation of the effects of isolation or the combined effects of isolation and habitat dynamic changes on patterns of genetic variability and population differentiation. We used nine fast-evolving microsatellite loci to contrast patterns of genetic variability in six coastal (three mainlands and three islands) populations of the cane toad near the mouth of the Amazon River. Results from Bayesian multilocus clustering approach and Discriminant Analyses of Principal Component were congruent in showing that each island population was genetically differentiated from the mainland populations. All FST values obtained from all pairwise comparisons were significant, ranging from 0.048 to 0.186. Estimates of both recent and historical gene flow were not significantly different from zero across all population pairs, except the two mainland populations inhabiting continuous habitats. Patterns of population differentiation, with a high level of population substructure and absence/restricted gene flow, suggested that island populations of R. marina are likely isolated since the Holocene sea-level rise. However, considering the similar levels of genetic variability found in both island and mainland populations, it is reliable to assume that they were also isolated for longer periods. Given the genetic uniqueness of each cane toad population, together with the high natural vulnerability of the coastal regions and intense human pressures, we suggest that these populations should be treated as discrete units for conservation management purposes.
This study presents a molecular phylogeny of the Saguinus genus, based on the analysis of the DNA sequences of five nuclear loci with Alu insertions in 10 species. The concatenated alignment produced a polytomic arrangement with four main groups, although only two clades-the Amazonian (S. midas, S. niger, and S. bicolor) and the Colombian (S. leucopus and S. oedipus) tamarins-were statistically significant. The emergence of the midas-bicolor clade was estimated at about 5 million years ago (mya), and that of the Colombian clade, at 4.6 mya. The phylogenetic relationships among the mustached tamarins (S. mystax, S. imperator, and S. labiatus) remained unresolved, as did the internal arrangement of the midas group. The lack of a clear consensus on the phylogeny of this group may be related to rapid bursts of evolutionary change within the context of a highly dynamic environment, which may be difficult to resolve using the available quantitative approaches. On the other hand, the discrepancies between mtDNA and nDNA in resolving phylogenies strongly indicate the role of reticulated evolution in the evolutionary history of this group. We hope that the advance of whole genome sequencing technology and increasing information on nuclear markers and SNPs, coupled with a better understanding of the geological phenomena that took place in western Amazonia over the past 20 million years, will shed further light on the phylogenetic history of these New World primates.
Plant-derived products may represent promising strategies in the treatment of Neglected Tropical Diseases (NTDs). From this perspective, it is observed that the Amazon phytogeographic region contains the tribe Canarieae of the Burseraceae family, composed of trees and shrubs supplied with resin channels. Its uses in folk medicine are related to aromatic properties, which have numerous medicinal applications and are present in reports from traditional peoples, sometimes as the only therapeutic resource. Despite its economic and pharmacological importance in the region, and although the family is distributed in all tropical and subtropical regions of the world, most of the scientific information available is limited to Asian and African species. Therefore, the present work aimed to review the secondary metabolites with possible pharmacological potential of the species Trattinnickia rhoifolia Willd, popularly known as “Breu sucuruba”. To this end, an identification key was created for chemical compounds with greater occurrence in the literature of the genus Trattinnickia. The most evident therapeutic activities in the consulted studies were antimicrobial, antioxidant, anti-inflammatory, antiviral, antifungal, anesthetic and antiparasitic. An expressive chemical and pharmacological relevance of the species was identified, although its potential is insufficiently explored, mainly in the face of the NTDs present in the Brazilian Amazon.
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