COVID-19 patients can excrete viable SARS-CoV-2 virus via urine and faeces, which has raised concerns over the possibility of COVID-19 transmission via aerosolized contaminated water or via the faecal-oral route. These concerns are especially exacerbated in many low- and middle-income countries, where untreated sewage is frequently discharged to surface waters. SARS-CoV-2 RNA has been detected in river water (RW) and raw wastewater (WW) samples. However, little is known about SARS-CoV-2 viability in these environmental matrices. Determining the persistence of SARS-CoV-2 in water under different environmental conditions is of great importance for basic assumptions in quantitative microbial risk assessment (QMRA). In this study, the persistence of SARS-CoV-2 was assessed using plaque assays following spiking of RW and WW samples with infectious SARS-CoV-2 that was previously isolated from a COVID-19 patient. These assays were carried out on autoclaved RW and WW samples, filtered (0.22 µm) and unfiltered, at 4°C and 24°C. Linear and nonlinear regression models were adjusted to the data. The Weibull regression model achieved the lowest root mean square error (RMSE) and was hence chosen to estimate T 90 and T 99 (time required for 1 log and 2 log reductions, respectively). SARS-CoV-2 remained viable longer in filtered compared with unfiltered samples. RW and WW showed T 90 values of 1.9 and 1.2 day and T 99 values of 6.4 and 4.0 days, respectively. When samples were filtered through 0.22 µm pore size membranes, T 90 values increased to 3.3 and 1.5 days, and T 99 increased to 8.5 and 4.5 days, for RW and WW samples, respectively. Remarkable increases in SARS-CoV-2 persistence were observed in assays at 4°C, which showed T 90 values of 7.7 and 5.5 days, and T 99 values of 18.7 and 17.5 days for RW and WW, respectively. These results highlight the variability of SARS-CoV-2 persistence in water and wastewater matrices and can be highly relevant to efforts aimed at quantifying water-related risks, which could be valuable for understanding and controlling the pandemic.

Alkaline treatment is widely used to reduce pathogens in sewage sludge in developing countries and guarantee that it is safe for use in agriculture. The aim of this study was to investigate the effect of alkaline treatment applied to waste-activated (WAS) and Upflow Anaerobic Sludge Blanket (UASB)-sludge on the bacterial community, pathogens (viable helminths eggs and Salmonella spp), and antibiotic resistance genes (ARG). The bacterial community structure was examined through denaturing gel gradient electrophoresis (DGGE), targeting 16S rRNA genes. Polymerase chain reaction (PCR) was applied to evaluate the presence of several ARGs. The conducted alkaline experiment consisted of adding hydrated lime (Ca(OH)) to sewage sludges. Samples were taken before and after 2, 24, 48, and 72 hours of treatment. Alkaline treatment changed considerably the bacterial community structure and after 24 hours, shifts in bacterial profiles were more pronounced in the UASB sludge sample than in WAS. Some bacteria remained under extreme pH conditions (pH > 12), such as Azospira oryzae and Dechloromonas denitrificans in the WAS samples, and Geothrix and Geobacter in the UASB sludge samples. The values of pathogens and indicators in the sludge after 24 hours of alkaline treatment meet sanitary law regulations and thus the sludges could have the potential to agricultural distribution. It is important to highlight that ARG, which are not currently present in sanitary regulations, were detected in the sludge samples after the alkaline treatment, which could be a concern for human health.

In 2014, Oxford Nanopore Technologies (ONT) introduced an affordable and portable sequencer called MinION. We reviewed emerging applications in water research and assessed progress made with this platform towards ubiquitous genetics. With >99% savings in upfront costs as compared to conventional platforms, the MinION put sequencing capacity into the hands of many researchers and enabled novel applications with diverse remits, including in countries without universal access to safe water and sanitation. However, to realize the MinION’s fabled portability, all the auxiliary equipment items for biomass concentration, genetic material extraction, cleanup, quantification, and sequencing library preparation also need to be lightweight and affordable. Only a few studies demonstrated fully portable workflows by using the MinION onboard a diving vessel, an oceanographic research ship, and at sewage treatment works. Lower nanopore sequencing read accuracy as compared to alternative platforms currently hinders MinION applications beyond research, and inclusion of positive and negative controls should become standard practice. ONT’s EPI2ME platform is a major step towards user-friendly bioinformatics. However, no consensus has yet emerged regarding the most appropriate bioinformatic pipeline, which hinders intercomparison of study results. Processing, storing, and interpreting large data sets remains a major challenge for ubiquitous genetics and democratizing sequencing applications.

RESUMOO Brasil é um dos maiores produtores de aves do mundo e se destaca na exportação de carne de frango, que tem papel relevante na economia do país. Como resultado do crescimento da indústria de processamento do frango, há também um significativo aumento na geração de efluentes. Uma alternativa interessante para o tratamento desses resíduos são os reatores anaeróbios. Este trabalho teve como objetivo avaliar o desempenho do sistema reator UASB-Filtro anaeróbio no tratamento de efluentes de abate de frangos. O estudo foi desenvolvido em um abatedouro avícola, situado na região metropolitana de Belo Horizonte, Minas Gerais. O sistema de tratamento foi composto por peneira estática, caixa de gordura, reator UASB e filtro anaeróbio. A vazão média diária de efluentes do abatedouro foi de 30m³/dia. A carga orgânica aplicada no reator UASB foi de 0,71kg DQO/m³.d. O monitoramento do sistema foi realizado por meio de análises físico-químicas do afluente e dos efluentes da caixa de gordura, reator UASB e filtro anaeróbio. Os parâmetros avaliados foram: temperatura, pH, demanda química de oxigênio (DQO), demanda bioquímica de oxigênio (DBO), sólidos suspensos totais (SST), e sólidos suspensos voláteis (SSV). Os valores efluentes médios encontrados para DBO, DQO e SST foram 106, 290 e 56mg/L, respectivamente. A eficiência de remoção do sistema para DBO variou de 83 a 99%, e para DQO de 50 a 98%. A eficiência de remoção média de SST e SSV foi de 92%. Conclui-se que o sistema reator UASB seguido de filtro anaeróbio apresentou alto desempenho na remoção de sólidos e carga orgânica. Dessa forma, esses reatores tornam-se uma alternativa viável para o tratamento de águas residuárias de frigoríficos, já que oferecem bons resultados de remoção de poluentes.Palavras-chave: digestão anaeróbia, impacto ambiental, agroindústria, remoção de sólidos, carga orgânica ABSTRACT Brazil is one of the largest poultry producers in the world and stands out in exportation of chicken meat, which plays an important role in the economy. As a result of the growth of the poultry processing industry, there is also a significant increase in the generation

Although the widespread use of sewage sludge in developing countries is common, little is known about how sludge disposal can affect the microbial composition and diversity of tropical soils. We evaluated the effects of the sewage sludges of two types of anaerobic digestors differing by the biological treatment they have undergone (Uplow Anaerobic Sludge Blanket – UASB and activated sludge digester-ASD), and two different of disposal methods (surface and incorporated) on tropical soils. Samples were taken from topsoil (0–10 cm) and analyzed by amplifying the 16S rRNA genes to study the microbial community and physicochemical analysis performed in concomitant. The results indicated that, in general, sewage sludge amendment (SSA) significantly changed the tropical soil bacterial community by the sludge type by application methods. Moreover, the redundancy analysis diagram (RDA) indicates that changes in soil chemical parameters over time due to SSA resulted in changes in the bacterial community's composition, increasing the population responsible for recycling nutrients in the soil.

This work has assessed the seasonal changes and the dynamics in the concentration of six pharmaceutical compounds during photolysis as a tertiary treatment of sewage previously treated by an anaerobic/aerobic system comprising a UASB (Upflow Anaerobic Sludge Blanket) reactor and a trickling filter (TF). The target compounds were four antibiotics (ciprofloxacin (CPF), clindamycin (CLM), sulfamethoxazole (SMX), and trimetoprim), one β-blocker (atenolol), and one anti-inflammatory (diclofenac (DCF)). Six hydraulic retention times (HRTs) were evaluated (5, 10, 20, 40, 80, and 160 min) with the intent of varying the ultraviolet C (UVC) radiation doses applied to the effluent from biological treatment containing the target contaminants. The concentrations of pharmaceutical compounds in the effluent of the UASB/TF system were in agreement with the concentration levels reported in the literature. Aside from DCF, the seasonality seems to be a preponderant characteristic regarding the pharmaceutical concentration found in the effluent of biological treatment systems. The radiation dose of 117 mJ cm seemed to be most suited for the photolysis application to tertiary treatment of domestic effluents. It was observed that lower UVC doses led to deconjugation of pharmaceuticals, which can result in increased concentrations of target pollutants in the photoreactor effluent.

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Um dos recentes desafios da abordagem denominada Big Data tem sido extrair informações relevantes de grandes quantidades de dados não estruturados, como por exemplo de textos escritos em diversos idiomas. A principal abordagem de análise de texto e linguagem por meio computacional é chamada de Processamento de Linguagem Natural (Natural Language Processing - NLP, na sigla em inglês). Identificar como as áreas do conhecimento estão utilizando as evoluções em seus domínios, no que tange à NLP, especialmente a Ciência da Informação, por fornecer os principais conceitos de tratamento de dados, informações e conhecimento, é o cerne desse estudo. Este foi estruturado tendo como base uma Revisão Sistemática da Literatura, entendendo ser essa uma abordagem capaz de fundamentar noções iniciais e, ao mesmo tempo, consistentes para a análise da questão central que motivou esse trabalho. Dentre os resultados encontrados está a pouca utilização dos recursos de NLP pela Ciência da Informação.