Specification and tuning of errors from dynamical models are important issues in data assimilation. In this work, we propose an iterative expectation-maximisation (EM) algorithm to estimate the model error covariances using classical extended and ensemble versions of the Kalman smoother. We show that, for additive model errors, the estimate of the error covariance converges. We also investigate other forms of model error, such as parametric or multiplicative errors. We show that additive Gaussian model error is able to compensate for non additive sources of error in the algorithms wepropose. We also demonstrate the limitations of the extended version of the algorithm and recommend the use of the more robust and flexible ensemble version. This article is a proof of concept of the methodology with the Lorenz-63 attractor. We developed an open-source Python library to enable future users to apply the algorithm to their own nonlinear dynamical models.

Capsule Summary An integrated, high resolution, data-driven regional modeling system has been recently developed for the Red Sea region and is being used for research and various environmental applications.

The ensemble Kalman filter (EnKF) is a popular method for state-parameters estimation of 8 subsurface flow and transport models based on field measurements. The common filtering 9 procedure is to directly update the state and parameters as one single vector, which is known 10 as the Joint-EnKF. In this study, we follow the one-step-ahead smoothing formulation of the

The ensemble Kalman filter (EnKF) is widely used for sequential data assimilation. It operates as a succession of forecast and analysis steps. In realistic large-scale applications, EnKFs are implemented with small ensembles and poorly known model error statistics. This limits their representativeness of the background error covariances and, thus, their performance. This work explores the efficiency of the one-step-ahead (OSA) smoothing formulation of the Bayesian filtering problem to enhance the data assimilation performance of EnKFs. Filtering with OSA smoothing introduces an updated step with future observations, conditioning the ensemble sampling with more information. This should provide an improved background ensemble in the analysis step, which may help to mitigate the suboptimal character of EnKF-based methods. Here, the authors demonstrate the efficiency of a stochastic EnKF with OSA smoothing for state estimation. They then introduce a deterministic-like EnKF-OSA based on the singular evolutive interpolated ensemble Kalman (SEIK) filter. The authors show that the proposed SEIK-OSA outperforms both SEIK, as it efficiently exploits the data twice, and the stochastic EnKF-OSA, as it avoids observational error undersampling. They present extensive assimilation results from numerical experiments conducted with the Lorenz-96 model to demonstrate SEIK-OSA’s capabilities.

Assimilating Gravity Recovery And Climate Experiment (GRACE) data into land hydrological models provides a valuable opportunity to improve the models' forecasts and increases our knowledge of terrestrial water storages (TWS). The assimilation, however, may harm the consistency between hydrological water fluxes, namely precipitation, evaporation, discharge, and water storage changes. To address this issue, we propose a weak constrained ensemble Kalman filter (WCEnKF) that maintains estimated water budgets in balance with other water fluxes. Therefore, in this study, GRACE terrestrial water storages data are assimilated into the WorldWide Water Resources Assessment (W3RA) hydrological model over the Earth's land areas covering 2002-2012. Multi-mission remotely sensed precipitation measurements from the Tropical Rainfall Measuring Mission (TRMM) and evaporation products from the Moderate Resolution Imaging Spectroradiometer (MODIS), as well as ground-based water discharge measurements are applied to close the water balance equation. The proposed WCEnKF contains two update steps; first, it incorporates observations from GRACE to improve model simulations of water storages, and second, uses the additional observations of precipitation, evaporation, and water discharge to establish the water budget closure. These steps are designed to account for error information associated with the included observation sets during the assimilation process. In order to evaluate the assimilation results, in addition to monitoring the water budget closure errors, in-situ groundwater measurements over the Mississippi River Basin in the US and the Murray-Darling Basin in Australia are used. Our results indicate approximately 24% improvement in the WCEnKF groundwater estimates over both basins compared to the use of (constraint-free) EnKF. WCEnKF also further reduces imbalance errors by approximately 82.53% (on average) and at the same time increases the correlations between the assimilation solutions and the water fluxes.