12 13 2 Heterosis, the observation that first generation hybrids outcompete the parental 14 lines, is widely used in increasing the productivity and yield of agricultural 15 crops 1,2 . However, heterosis is lost in the following generations because of genetic 16 segregation. In addition, the high cost of hybrid seed production hinders the 17 application of heterosis in many crops. Clonal reproduction through seeds could 18 be revolutionary for agriculture by allowing self-propagation of F1 hybrids 3,4 .
19Here we show that heterozygosity of F1 hybrid rice can be fixed and thus 20 propagated without additional crossing. First, we showed that multiplex editing 21 of three key meiotic genes 5,6 in hybrid rice leads to the production of clonal 22 diploid gametes and tetraploid seeds. Next, editing of the MATRILINEAL (MTL) 23 gene that involved in fertilization 7,8 results in the induction of haploid seeds in 24 hybrid rice. By simultaneous editing of these four endogenous genes in hybrid 25 rice using the CRISPR/Cas9 system, we obtained in one generation plants able to 26 propagate clonally through seeds. This opens the possibility to fix heterozygosity 27 of hybrid varieties in food crops. 28 Heterosis (also known as hybrid vigor) is a phenomenon whereby hybrid 29 offspring of genetically diverse individuals display increased vigor relative to their 30 homozygous parents. Heterosis has been widely applied in agriculture to dramatically 31improve the production and to broaden adaptability of crops 1,2 . However, the essential 32 process of hybrid seed production increases the seed cost and even prohibits its 33 application in many crops. It has been proposed to fix the heterosis of hybrid crop by 34 introduction of apomixis 3 . Apomixis is an asexual reproductive strategy where the 35 3 offspring were generated through seeds, but without meiosis and fertilization. 36 Although it has been described in many flowering plant taxa 9 , apomixis has not been 37 reported in major crops. Previously, it was revealed that combined mutations of three 38 genes that affect key meiotic processes created a genotype called MiMe (Mitosis 39 instead of Meiosis) in which meiosis is totally replaced by mitotic-like division, 40 leading to the production of male and female clonal diploid gametes in Arabidopsis 41 and rice 5,6 . However, the self-fertilization of MiMe resulted in doubling of ploidy at 42 each generation. By crossing Arabidopsis MiMe with CenH3-mediated chromosome 43 elimination line, clonal diploid offspring were obtained 4 . However, the system still 44 relies on the crossing between different plants and the CENH3-mediated chromosome 45 elimination appeared to be difficult to transfer to other species 10 . Therefore, further 46 work is required to achieve the aim of heterosis fixation in self-fertilized hybrids.47