Towards a revised Amphinomidae (Annelida, Amphinomida): description and affinities of a new genus and species from the Nile Deep‐sea Fan, Mediterranean Sea

Borda, Elizabeth; Kudenov, Jerry D.; Bienhold, Christina; Rouse, Greg W.

doi:10.1111/j.1463-6409.2012.00529.x

Cited by 47 publications

(68 citation statements)

References 45 publications

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“…Previously published data from Crete, Malta, Gulf of Mexico, Caribbean Sea and Gulf of Guinea were also included in the analyses (Ahrens et al, 2013, with accession numbers: Crete KC017526-8, 30; Malta KC017553-56; Caribbean Sea KC017521,24-25, KC017552; Gulf of Mexico KC017587-90 and Gulf of Guinea KC0 17480-2, KC017569). Taking into account the high rates (around 30%) of the genetic distances observed among other amphinomid genera (e.g., Borda et al, 2012) no out-group could be selected for the phylogenetic analyses. Therefore, the tree constriction midpoint rooted technique was selected, following Ahrens et al (2013).…”

Section: Sequence Analysismentioning

confidence: 99%

Community structure and population genetics of Eastern Mediterranean polychaetes

et al. 2014

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Species and genetic diversity are often found to co-vary since they are influenced by external factors in similar ways. In this paper, we analyse the genetic differences of the abundant polychaete Hermodice carunculata (Pallas, 1766) during two successive years at two locations in northern Crete (Aegean Sea) and compare them to other populations in the Mediterranean Sea and the Atlantic Ocean. The genetic analysis is combined with an analysis of ecological divergence of the total polychaete community structure (beta diversity) at these locations. The phylogenetic analysis of all included H. carunculata populations revealed two main clades, one exclusively found in the Mediterranean and a second occurring in both the Mediterranean and the Atlantic. Genetic diversity indices reveal unexpectedly high differences between the two Cretan populations, despite the absence of apparent oceanographic barriers. A similarly high divergence, represented by a high beta diversity index, was observed between the polychaete communities at the two locations. This comparatively high divergence of the genetic structure of a dominant species and the total polychaete community might be explained by the strong influence of local environmental factors as well as inter-specific interactions between the dominance of a single species and the members of the community.

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Section: Sequence Analysismentioning

confidence: 99%

Community structure and population genetics of Eastern Mediterranean polychaetes

et al. 2014

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“…Protocols for whole genomic DNA extraction, amplification and sequencing procedures are as reported by Borda et al [45], unless stated otherwise. Electronic supplementary material , table S2 lists primers and annealing temperature profiles used for amplification of mt cytochrome c oxidase subunit I (COI), and mt 16S rDNA (16S).…”

Section: Methodsmentioning

confidence: 99%

“…Electronic supplementary material , table S2 lists primers and annealing temperature profiles used for amplification of mt cytochrome c oxidase subunit I (COI), and mt 16S rDNA (16S). Amplification protocols for the nuclear internal transcribed spacer 1 (ITS1) and 28S rDNA (28S) followed Nygren & Pleijel [46] and Borda et al [45], respectively. All data were analysed using maximum-likelihood (ML) and Bayesian inference (BI) procedures following methods described in [45], as was the choice of outgroup to root the analyses (i.e.…”

Section: Methodsmentioning

confidence: 99%

Cryptic species ofArchinome(Annelida: Amphinomida) from vents and seeps

et al. 2013

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Since its description from the Galapagos Rift in the mid-1980s, Archinome rosacea has been recorded at hydrothermal vents in the Pacific, Atlantic and Indian Oceans. Only recently was a second species described from the Pacific Antarctic Ridge. We inferred the identities and evolutionary relationships of Archinome representatives sampled from across the hydrothermal vent range of the genus, which is now extended to cold methane seeps. Species delimitation using mitochondrial cytochrome c oxidase subunit I (COI) recovered up to six lineages, whereas concatenated datasets (COI, 16S, 28S and ITS1) supported only four or five of these as clades. Morphological approaches alone were inconclusive to verify the identities of species owing to the lack of discrete diagnostic characters. We recognize five Archinome species, with three that are new to science. The new species, designated based on molecular evidence alone, include: Archinome levinae n. sp., which occurs at both vents and seeps in the east Pacific, Archinome tethyana n. sp., which inhabits Atlantic vents and Archinome jasoni n. sp., also present in the Atlantic, and whose distribution extends to the Indian and southwest Pacific Oceans. Biogeographic connections between vents and seeps are highlighted, as are potential evolutionary links among populations from vent fields located in the east Pacific and Atlantic Oceans, and Atlantic and Indian Oceans; the latter presented for the first time.

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“…This species has been widely recorded from the region in ecological and in popular articles but recent studies by Barroso et al (2010) and Borda et al (2012) would suggest that the species actually represent a suites of species and it is probable that E. complanata is restricted to the Caribbean and not the widespread "cosmopolitan" species as has previously been reported.…”

Section: Genus Eurythoe Kinberg 1857mentioning

confidence: 96%

“…It is suggested that this species identification which has not been formally published needs careful checking given the taxonomic problems of the family especially this supposedly widespread tropical species (Borda et al 2012).…”

Section: Family Amphinomidae Savigny In Lamarck 1818mentioning

confidence: 99%

Lizard Island Polychaete Workshop: sampling sites and a checklist of polychaetes

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Hutchings

2015

Zootaxa

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In August 2013, a two week polychaete workshop was held at Lizard Island, Great Barrier Reef. Twenty-one sites representing 121 collection events were sampled for polychetes around Lizard and on the Outer Barrier. Workshop participants sorted polychaetes to family and each participant received on loan selected families to work up. This Zootaxa monograph describes 91 new species, 67 new records for Lizard Island, and 19 for Australia. Details regarding the habitats and locations are provided in Table 2 together with two maps (Figs 1, 2) showing sampling locations. In this paper we also list previously collected polychaete material from the region together with any published records for families which are not included in this volume.

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Towards a revised Amphinomidae (Annelida, Amphinomida): description and affinities of a new genus and species from the Nile Deep‐sea Fan, Mediterranean Sea

Cited by 47 publications

References 45 publications

Community structure and population genetics of Eastern Mediterranean polychaetes

Community structure and population genetics of Eastern Mediterranean polychaetes

Cryptic species ofArchinome(Annelida: Amphinomida) from vents and seeps

Lizard Island Polychaete Workshop: sampling sites and a checklist of polychaetes

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