Population data for Southern Spain and Canary Islands of HLADQA1, PM and D1S80 loci

Flores, Inmaculada; Frías, Isaac A.M.; Prieto, Victoria; Andrés, Isabel; Sánz, P.

doi:10.1016/s0379-0738(00)00419-9

Cited by 6 publications

(7 citation statements)

References 4 publications

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“…Together, these alleles account for approximately 70% of the alleles observed there (Vallinoto, 1996;Heidrich et al, 1995). Among European populations, D1S80*18 and D1S80*24 are the most frequent (Falcone et al, 1995;Flores et al, 2001). Amerindians show a trimodal pattern, with peaks for D1S80*18, D1S80*24 and D1S80*30 (Budowle et al, 1991;Latorra et al, 1994;Zago et al, 1996).…”

Section: D1s80mentioning

confidence: 99%

“…#-the vWA1*13 and D1S80*17 less frequent alleles have been collapsed for this analysis. [Alonso et al (1993);Bell et al (2000); Boerwinkle et al (1989); Budowle et al (1995); Buresi et al (1995); Chakraborty et al (1991);D'Aloja et al (1992); Deka et al (1992;1994); Destro-Bisol et al (1994;; Evans et al (1993); Falcone et al (1995); Flores et al (2001); Gamero et al (2000;; Gené et al (1993;; Gusmão et al (1997;; Gutowski et al (1995); Halos et al (1999);Hammond et al (1994); Heidrich et al (1995); Hixon et al (1993);Latorra et al (1994); Maviglia et al (2001); …”

Section: Genotype Distributionmentioning

confidence: 99%

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Genetic characterization of the population of São Luís, MA, Brazil

et al. 2005

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Five loci (vWA1, F13A1, D12S67, Apo-B and D1S80) were investigated by polyacrylamide gel electrophoresis followed by silver staining in a sample of 177 individuals from the population of São Luís, State of Maranhão, Brazil. A total of 70 different alleles were identified. A statistically significant deviation from the Hardy-Weinberg equilibrium was observed in a single locus (F13A1, p = 0.0075). The average heterozygosity (H) was estimated at 77.7%, the mean number of alleles per locus as 14. The PD (capacity of genotype differentiation at each locus) ranged from 88.9% (vWA1) to 96.7% (F13A1). The combined PE (power of exclusion) of these five loci was 99.8%. In terms of racial admixture (42% European, 39% Indian, and 19% African Black ancestry), São Luís presented an estimate similar to Belém, another trihybrid Amazonian population.

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Section: D1s80mentioning

confidence: 99%

Section: Genotype Distributionmentioning

confidence: 99%

Genetic characterization of the population of São Luís, MA, Brazil

et al. 2005

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“…The problem is particularly acute in countries where only a limited number of loci (<13) are used in DNA typing, due to expense and technologic limitations. Notably, some laboratories still use four 4,5 and six STR 7‐9 markers for paternity testing.…”

mentioning

confidence: 99%

Evaluating DNA tests of motherless cases using a Philippine genetic database

et al. 2002

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“…This article presents data for the low density lipoprotein receptor (LDLR), glycophorin A (GYPA), hemoglobin G gammaglobin (HBGG), D7S8, and group specific component (Gc) loci in a sample of 344 unrelated Brazilian individuals living in the city of São Paulo, thus providing an additional database for forensic applications because these genetic loci are routinely used by laboratories around the world. [1][2][3][4][5][6][7][8][9][10][11][12][13][14][15][16] …”

mentioning

confidence: 99%

Brazilian Population Data on the Polymerase Chain Reaction-Based Loci LDLR, GYPA, HBGG, D7S8, and Gc

Soares-Vieira

Billerbeck

Iwamura

et al. 2003

The American Journal of Forensic Medicine and Pathology

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Gene and genotype frequencies in relation to the low density lipoprotein receptor (LDLR), glycophorin A (GYPA), hemoglobin G gammaglobin (HBGG), D7S8, and group specific component (Gc) loci were determined in a sample of 344 unrelated individuals (250 whites and 94 mulattoes) living in the city of São Paulo, Brazil. DNA was extracted from 5 mL of peripheral blood obtained from each of the 344 volunteers by the salting-out procedure. Polymerase chain reaction and reverse dot-blot analysis were performed with the Amplitype PM PCR Amplification and Typing Kit (Polymarker Multiplex; Applied Biosystems, Foster City, CA) under conditions recommended by the manufacturer. Estimated allele frequencies in the white sample were in the usual range of that of other United States and European population groups. In any case, genotype distributions for these loci did not deviate significantly from Hardy-Weinberg equilibrium proportions. Only 1 marginally significant (0.01 < P < 0.05) association, between loci HBGG and Gc, was detected in our mulatto sample out of a total of 20 possible pairwise comparisons of the 5 loci for both data sets. Allele frequencies were significantly different (P < 0.001) at the HBGG and Gc loci when the white and mulatto samples were compared. Biologic relationship exclusion probabilities (test powers) were calculated for the data. A Brazilian database has thus been established for the loci LDLR, GYPA, HBGG, D7S8, and Gc, 5 polymerase chain reaction-based loci systems that have been shown to be a useful tool for biologic relationship identification and exclusion.

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Population data for Southern Spain and Canary Islands of HLADQA1, PM and D1S80 loci

Cited by 6 publications

References 4 publications

Genetic characterization of the population of São Luís, MA, Brazil

Genetic characterization of the population of São Luís, MA, Brazil

Evaluating DNA tests of motherless cases using a Philippine genetic database

Brazilian Population Data on the Polymerase Chain Reaction-Based Loci LDLR, GYPA, HBGG, D7S8, and Gc

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