Niabella ginsenosidivorans sp. nov., isolated from compost

Yi, Kwon Jung; Im, Wan Taek; Kim, Dong Ho; Liu, Qing Mei; Kim, Soo Ki

doi:10.1007/s12275-015-5463-z

Cited by 8 publications

(1 citation statement)

References 27 publications

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“…by Kim et al [6], 11 specific names have been validly published [2,3,[6][7][8][9][10][11][12][13] (https://lpsn.dsmz.de/genus/niabella). The names of 'Niabella terrae' [14] and 'Niabella thaonhiensis' [15] were proposed but have not been validated at the time of this writing.…”

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confidence: 99%

Niabella beijingensis sp. nov. and Thermomonas beijingensis sp. nov., two bacteria from constructed wetland

Guo

Zhu

et al. 2022

International Journal of Systematic and Evolutionary Microbiology

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Two Gram-stain-negative, aerobic, non-motile and rod-shaped bacterial strains designated 3A5MI-3T and RSS-23T were isolated from the Dragon-shaped Wetland System in Beijing Olympic Park, PR China. Strain 3A5MI-3T grew at 15–45 °C, pH 5.0–9.0 and with 0–2 % NaCl (w/v), and strain RSS-23T grew at 15-40 oC, pH 5.5–9.0 and with 0–1 % NaCl (w/v). Phylogenetic analyses of 16S rRNA gene sequences revealed that strains 3A5MI-3T and RSS-23T were members of Bacteroidetes and Proteobacteria , respectively. Phylogenetically closest relatives of strains 3A5MI-3T and RSS-23T were Niabella pedocola R384T and Thermomonas aquatica SY21T, respectively. The cells of strain 3A5MI-3T contained menaquinone MK-7 and phosphatidylethanolamine, and the major cellular fatty acids were composed of iso-C15 : 0, iso-C15 : 1 ω6c and/or iso-C15 : 1 ω7c, iso-C17 : 0 3-OH, C16 : 0 and summed feature 3 (C16 : 1 ω7c/C16 : 1 ω6c). Strain RSS-23T contained ubiquinone Q-8 and diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, two unknown phospholipids and an unknown lipid, and its major cellular fatty acids were iso-C15 : 0, iso-C17 : 1 ω9c, iso-C11 : 0 3-OH and summed feature 3 (C16 : 1 ω7c/C16 : 1 ω6c). DNA sequencing resulted in 6.59 Mb for the strain 3A5MI-3T genome and 2.79 Mb for the strain RSS-23T genome. The calculated G+C molar contents for strains 3A5MI-3T and RSS-23T were 47.07 and 61.21 mol%, respectively. According to phenotypic and phylogenetic characteristics, strains 3A5MI-3T and RSS-23T represent novel species of the genera Niabella and Thermomonas for which the names Niabella beijingensis sp. nov. and Thermomonas beijingensis sp. nov. are proposed. The type strain for N. beijingensis sp. nov. is 3A5MI-3T (=CGMCC 1.17737T=KCTC 82817T). The type strain for T. beijingensis sp. nov. is RSS-23T (=CGMCC 1.17738T=KCTC 82820T).

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confidence: 99%

Niabella beijingensis sp. nov. and Thermomonas beijingensis sp. nov., two bacteria from constructed wetland

Guo

Zhu

et al. 2022

International Journal of Systematic and Evolutionary Microbiology

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Niabella aquatica sp. nov., isolated from lake water

Ṣiddiqi

2016

International Journal of Systematic and Evolutionary Microbiology

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A Gram-reaction-negative, strictly aerobic, non-motile, yellow and rod-shaped bacterium (designated RP-2 T ) isolated from lake water, was characterized by a polyphasic approach to clarify its taxonomic position. Strain RP-2 T was observed to grow optimally at 30 C and at pH 7.0 on R2A medium. Phylogenetic analysis based on 16S rRNA gene sequences indicated that RP-2 T represented a member of the genus Niabella of the family Chitinophagaceae and was most closely related to Niabella yanshanensis KACC 14980 T (96.6 %), Niabella ginsengisoli KACC 13021 T (96.5 %), Niabella drilacis DSM 25811 T (95.7 %) and Niabella aurantiaca KACC 11698 T (95.6 %). The DNA G+C content was 44.5 mol%. The major polar lipids were diphosphatidylglycerol (DPG) and phosphatidylethanolamine (PE). The predominant quinone was MK-7. The major fatty acids were iso-C 15:0 , iso-C 15:1 G, iso-C 17:0 3-OH and summed feature 3 (comprising C 16:1 !7c and/or C 16:1 !6c) supported the affiliation of RP-2 T to the genus Niabella. However, RP-2 T could be distinguished genotypically and phenotypically from the species of the genus Niabella with validly published names. The novel isolate therefore represents a novel species, for which the name Niabella aquatica sp. nov. is proposed, with the type strain RP-2 T (=KACC 18623 T =JCM 30952 T ).

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Niabella hibiscisoli sp. nov., isolated from soil of a Rose of Sharon garden

Ngo

Trinh

Yan

et al. 2017

International Journal of Systematic and Evolutionary Microbiology

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A Gram-stain-negative, strictly aerobic, non-motile, rod-shaped and yellow-pigmented bacterium, designated strain THG-DN5.5T, was isolated from soil of a Rose of Sharon garden in Daejeon, South Korea. According to 16S rRNA gene sequence comparisons, strain THG-DN5.5T was found to be most closely related to Niabella yanshanensis CCBAU 05354T (97.7 % sequence similarity), Niabella ginsengisoli GR10-1T (97.0 %), 'Niabella terrae' ICM 1-15 (96.0 %), Niabella soli DSM 19437T (95.7 %) and Niabella aquatica RP-2T (95.6 %). The DNA-DNA relatedness between strain THG-DN5.5T and its phylogenetically closest neighbours was below 50.0 %. The DNA G+C content was 43.1 mol%. The major polar lipid of strain THG-DN5.5T was found to be phosphatidylethanolamine. The major fatty acids were identified as C16 : 0, iso-C15 : 0, iso-C15 : 1 G, and iso-C17 : 0 3-OH. MK-7 was the only menaquinone present. These data supported the affiliation of strain THG-DN5.5T to the genus Niabella. Strain THG-DN5.5T was distinguished from related species of the genus Niabellaby physiological and biochemical tests. In conclusion, strain THG-DN5.5T represents a novel species of the genus Niabella, for which the name Niabella hibiscisolisp. nov. is proposed. The type strain is THG-DN5.5T (=KACC 18857T=CCTCC AB 2016086T).

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Niabella ginsenosidivorans sp. nov., isolated from compost

Cited by 8 publications

References 27 publications

Niabella beijingensis sp. nov. and Thermomonas beijingensis sp. nov., two bacteria from constructed wetland

Niabella beijingensis sp. nov. and Thermomonas beijingensis sp. nov., two bacteria from constructed wetland

Niabella aquatica sp. nov., isolated from lake water

Niabella hibiscisoli sp. nov., isolated from soil of a Rose of Sharon garden

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