Microsatellite fingerprinting of homonymous grapevine (Vitis vinifera L.) varieties in neighboring regions of South-East Turkey

Karataş, Hüseyin; Değirmenci, Dilek; Velasco, Riccardo; Vezzulli, S.; Bodur, Çağrı; Ağaoğlu, Y. Sabit

doi:10.1016/j.scienta.2007.07.001

Cited by 27 publications

(13 citation statements)

References 25 publications

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“…A certain quantity of homozygosis is admissible, since vines are hermaphrodite and tend to self-fertilize, but the analyses may have deciphered heterozygosis as homozygosis in degraded genetic material. The ancient and recent cultivars may also have become extinct or evolved, remaining difficult to identify with respect to contemporary genetic profiles (Karatas et al, 2007). Assuming that the archaeological and recent residues could contain DNA of many varieties, we were unable to obtain exact answers about the varieties with only seven microsatellites and the low homologies encountered.…”

Section: Discussionmentioning

confidence: 94%

Microscope observations and DNA analysis of wine residues from Roman amphorae found in Ukraine and from bottles of recent Tuscan wines

Milanesi

Bigliazzi

Faleri

et al. 2011

Journal of Archaeological Science

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Section: Discussionmentioning

confidence: 94%

Microscope observations and DNA analysis of wine residues from Roman amphorae found in Ukraine and from bottles of recent Tuscan wines

Milanesi

Bigliazzi

Faleri

et al. 2011

Journal of Archaeological Science

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“…More specifically, Anatolia has long been linked with grapevine, especially in its eastern and southeastern regions to which earlier authors commonly ascribe the origin of viticulture and wine making (Ağaoğlu and Çelik ; Ağaoğlu et al ). With this long‐standing history, southeast Anatolia can boast both significant wild grapevine populations and a rich panel of local cultivars (Karataş et al ). Analysing genetic diversity and relationships between wild ( Vitis vinifera ssp.…”

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confidence: 99%

Genetic diversity of wild and cultivated grapevine accessions from southeast Turkey

Karataş

Laucou

et al. 2014

Hereditas

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Wild grapevine genetic diversity in southeast Turkey has not been documented to date. In the present work, in order to clarify the relationships between wild and cultivated grape accessions from southeastern Turkey, 22 nuclear and three chloroplast microsatellite loci were used on 21 wild grapevine Vitis vinifera L. ssp. sylvestris (Gmelin) and 13 cultivated grapevine Vitis vinifera ssp. sativa accessions. The number of alleles per SSR locus ranged from 4 (VVIn16) to 20 (VVIv67) and the mean allele number per locus was 10.09. Expected locus heterozygosity ranged from 0.586 (locus VVIb01) to 0.898 (locus (VVIv67)). The three cpSSR molecular markers presented variation in size both in cultivars and in wild Turkish accessions. Two size variants were detected for cpSSR3 (106 and 107 bp) for cpSSR5 (104 and 105 bp), and for cpSSR10 (115 and 116 bp). The six alleles in wild grapevines fell into three haplotypes B, C and D. A genetic structure according to accessions taxonomic status (wild or cultivated) was revealed by UPGMA analysis. This highlighted a clear separation between domesticated and wild accessions in Turkish germplasm. The results pointed out the need to further collect and characterize this wild and cultivated grapevine germplasm.

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“…These can be related seed-based characteristics, number of markers, different parents and ecologies. Karataş et al (2007) was characterized by use of six highly polymorphic microsatellite loci (VVS2, VVMD5, VVMD7, VVMD27, VrZAG62, and VrZAG79) 39 Turkish grapevine (V. vinifera L.). They observed similar results when analysing the dendrogram was actually the general tendency of cultivars of the same regions to group together rather than genotypes belonging to the same variety.…”

Section: Discussionmentioning

confidence: 99%

Molecular and ampelographic characterization of some grape hybrids (Vitis vinifera L.)

Atak¹,

ALTINDžL²,

GOuml³

et al. 2012

Afr. J. Agric. Res.

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23 hybrids were selected as potential cultivar candidates due to their superior characteristics and were created at the Atatürk Horticultural Central Research Institute (AHCRI) or the Tekirdağ Viticulture Research Institute (TVRI). In this study, the ampelographic and molecular characteristics of 23 grapevine hybrids created in two different breeding studies were determined. Ampelographic data were collected during two vegetation periods in Yalova, Turkey. Total of 68 ampelographic characteristics were identified for 23 hybrids. Polymerase chain reaction (PCR) -based microsatellite technique was used to analyse 23 hybrids and 2 standard varieties. The genetic relationships were defined with 20 simple sequence repeat (SSR) markers, and genetic similarity indices, principal component analysis graphs and phylogenetic relationship dendrograms were produced depending on the hybrid and SSR marker size of the allele which ranged from 88 to 294 bp. Additionally, ampelographic and molecular scores were evaluated together. After evaluation of molecular and ampelographic data together, similarity ratio was increased and ampelographic characterisation was dominated by molecular characterization. It may be related using more ampelographic characters in the study. Variety candidates which were obtained from different Institutes were characterized and taken under protection with this study. The information in the obtained database can be used for cultivar identification, parentage analysis, and legal protection. Also, some ampelographic characterization results will be used in determining the priority of registration.

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Microsatellite fingerprinting of homonymous grapevine (Vitis vinifera L.) varieties in neighboring regions of South-East Turkey

Cited by 27 publications

References 25 publications

Microscope observations and DNA analysis of wine residues from Roman amphorae found in Ukraine and from bottles of recent Tuscan wines

Microscope observations and DNA analysis of wine residues from Roman amphorae found in Ukraine and from bottles of recent Tuscan wines

Genetic diversity of wild and cultivated grapevine accessions from southeast Turkey

Molecular and ampelographic characterization of some grape hybrids (Vitis vinifera L.)

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