The judicial method of dispute resolution has aroused in Africa countless turnarounds of positions, from rejection to acceptance, from construction to destruction, to allow its transformation. It seems to have recently stabilized in the figure of the African Court of Justice and Human Rights, merging the two existing regional judicial bodies. It is already known to us that the two Tribunals have two main pre-defined functions, one that deals with the resolution of conflicts between States of the continent and the other on the protection of human rights, which are quite different roles. So, in this article, we analyze all impediments of the judicial system of African human rights to answer the question of whether it is best for African human rights to keep the tribunals separate, regardless of the desire to reduce costs or merger is better to ensure more effectively the protection of human rights?