Genetic diversity analysis of some species in Brassicaceae family with ISSR markers

Maraş-Vanlioğlu, Fatma Gül; Yaman, Hümeyra; Kayaçetin, Fatma

doi:10.38042/biost.2020.29.01.05

Cited by 9 publications

(4 citation statements)

References 40 publications

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“…The analysis clearly grouped wild grown rose hip into bigger fruited ones, sweeter ones or those with a higher content of polyphenolic compounds (Figure 1). Previous studies also indicated large diversity among ecotypes in wild and cultivated plants by using PCA analysis [76][77][78][79][80][81][82].…”

Section: Principal Compenent Analysis (Pca)mentioning

confidence: 99%

Morphological and Biochemical Diversity in Fruits of Unsprayed Rosa canina and Rosa dumalis Ecotypes Found in Different Agroecological Conditions

et al. 2021

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The Rosa is one of the most diverse genera in the plant kingdom and, in particular, its fruits have been used for multiple purposes in different parts of the world for centuries. Within the genus, Rosa canina and Rosa dumalis are, economically, the most important species and dominate Rosa fruit production. In this study, some important fruit and shrub traits of ten Rosa canina and ten Rosa dumalis ecotypes collected from rural areas of Kars province, located in the east Anatolia region of Turkey were investigated. We found significant differences among ecotypes in most of the morphological and biochemical traits. The ecotypes were found between 1446–2210 m altitude. Fruit weight and fruit flesh ratio ranged from 2.95 g to 4.72 g and 62.55% to 74.42%, respectively. SSC (Soluble Solid Content), Vitamin C, total phenolic, total flavonoid, total carotenoid, and total anthocyanin content of the ecotypes ranged from 16.9–22.7%, 430–690 mg per 100 g FW (fresh weight), 390–532 mg gallic acid equivalent per 100 g FW, 0.88–2.04 mg per g FW, 6.83–15.17 mg per g FW and 3.62–7.81 mg cyanidin-3-glucoside equivalent per kg, respectively. Antioxidant activity was determined to be between 19.7–34.7 mg ascorbic acid equivalent per g fresh weight. Rosa ecotypes contained chlorogenic acid and rutin the most as phenolic compound. Our results indicated great diversity within both R. canina and R. dumalis fruits.

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Section: Principal Compenent Analysis (Pca)mentioning

confidence: 99%

Morphological and Biochemical Diversity in Fruits of Unsprayed Rosa canina and Rosa dumalis Ecotypes Found in Different Agroecological Conditions

et al. 2021

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“…The number of Crambe species that are endangered necessitates a broad level of genetic diversity analysis for safeguarding and preservation of biodiversity, as well as the development of contemporary varieties of Crambe . Information regarding gene pool polymorphism can be obtained from genetic structure analysis of Crambe populations, demonstrating genetic variance within populations (Maraş Vanlıoğlu et al . 2020).…”

Section: Introductionmentioning

confidence: 99%

Assessment of genetic diversity and DNA fingerprinting of rare species of the genus Crambe (Brassicaceae)

Chokheli

Shmaraeva

Корниенко

et al. 2022

Crop & Pasture Science

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Context Preservation of genetic diversity of species is a pressing issue; in particular, the preservation of the gene pool of many rare and endangered plants is a priority. Species of the genus Crambe (family Brassicaceae) have potential in agriculture and bioremediation. Aims This study aims to assess the genetic diversity and DNA fingerprint of five rare species of the genus Crambe, and to develop the concept of a genetic passport for rare plants. Methods DNA fingerprinting was conducted via the inter simple sequence repeat (ISSR) method, using six ISSR primers. Hierarchical cluster analysis of the species was performed. Key results In total, 145 polymorphic loci were detected. The studied species formed two different clusters on genetic dendrogram analysis. The first cluster comprised two species, Crambe steveniana and C. tataria from a single subsection (Tatariae), forming a common clade. They were the most genetically close species with genetic similarity of 0.8431. The remaining three species (C. cordifolia, C. maritima, C. pinnatifida), from another subsection of Crambe, formed nodes from the general clade. Conclusions The findings allow plants to be genetically certified using our methods and informative ISSR primers for rare plants. We were able to propose a genetic formula identifying a species and present an example of a genetic passport for rare plants. The genetic structure of C. pinnatifida was investigated for the first time. Implications The present findings contribute to the systematics and critical investigation of rare plant species with genetic resource potential. A genetic passport could be used in the protection of copyright of agricultural varieties.

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“…Turkey is well-known for its rich flora and less-known plants, including fruits, which are widespread with a broad geographic distribution [1][2][3].…”

Section: Introductionmentioning

confidence: 99%

Sustainable Mulberry (Morus nigra L., Morus alba L. and Morus rubra L.) Production in Eastern Turkey

Can

Kazankaya

Orman³

et al. 2021

Sustainability

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In this study, a total of 55 wild-grown mulberry landraces belonging to Morus alba L., Morus rubra L., and Morus nigra L. species (Rosales order, Moraceae family, Morus L. genus) were sampled around the Van Lake basin, and some fruit characteristics were determined. All landraces are naturally grown in the Lake Van basin under pesticide-free conditions. As fruit character, phenolic compounds (gallic acid, catechin, quercetin, protocatechuic acid, vanillic acid, rutin, chlorogenic acid, caffeic acid, syringic acid, p-coumaric acid, ferulic acid, and phlorizin) and organic acids (malic acid, citric acid, tartaric acid, succinic acid, fumaric acid and ascorbic acid) were determined. Principal component analysis (PCA) was performed to determine the correlation between mulberry species in terms of biochemical compounds. As a result of PCA-biplot analysis, two variations were sufficient to explain the correlation between phenolic compounds and organic acids. This ratio reveals that mulberry species are separated with sharp boundaries in terms of biochemical compounds. Chlorogenic acid and rutin content were high in all mulberry landraces. The highest chlorogenic acid content was detected in landrace 65VN03 belonging to M. rubra (3.778 mg/g), 65GV12 belonging to M. nigra (3.526 mg/g), 13AD08 belonging to M. rubra (2.461 mg/g), and 13AH02 belonging to M. rubra (6.246 mg/g) landraces. In terms of organic acid content, malic acid was the dominant organic acid for genotypes. The rich bioactive compounds make M. alba, M. rubra, and M. nigra landraces as cultivar candidates for breeding purposes. It is a valuable source of bioactive agents that may have prevented humans from oxidative-stress-related diseases.

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Genetic diversity analysis of some species in Brassicaceae family with ISSR markers

Cited by 9 publications

References 40 publications

Morphological and Biochemical Diversity in Fruits of Unsprayed Rosa canina and Rosa dumalis Ecotypes Found in Different Agroecological Conditions

Morphological and Biochemical Diversity in Fruits of Unsprayed Rosa canina and Rosa dumalis Ecotypes Found in Different Agroecological Conditions

Assessment of genetic diversity and DNA fingerprinting of rare species of the genus Crambe (Brassicaceae)

Sustainable Mulberry (Morus nigra L., Morus alba L. and Morus rubra L.) Production in Eastern Turkey

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