Discovery of lanthanide-dependent methylotrophy and screening methods for lanthanide-dependent methylotrophs

Tani, Akio; Mitsui, Ryoji; Nakagawa, Tomoyuki

doi:10.1016/bs.mie.2021.01.031

Cited by 5 publications

(6 citation statements)

References 37 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Perhaps surprisingly, rather than being restricted to a somewhat obscure group of extremophilic methanotrophs, putative REE‐dependent methanol dehydrogenases have been described in a broad range of Gram‐negative bacteria from a range of environmental niches (Chistoserdova, 2017 ; Howat et al., 2018 ; Kato et al., 2020 ; Picone et al., 2021 ; Ramachandran & Walsh, 2015 ; Tani et al., 2021 ; Thulasi et al., 2018 ). Phylogenetic analysis of the XoxF/MxaF family showed that there are six clades, five XoxF clades and a single MxaF clade.…”

Section: Physiological Role Of Rare Earth Elementsmentioning

confidence: 99%

Rare earth elements in biology: From biochemical curiosity to solutions for extractive industries

Rocha,

Alexandrov,

Scott

2024

Microbial Biotechnology

View full text Add to dashboard Cite

Rare earth elements (REEs) are critical for our modern lifestyles and the transition to a low‐carbon economy. Recent advances in our understanding of the role of REEs in biology, particularly methylotrophy, have provided opportunities to explore biotechnological innovations to improve REE mining and recycling. In addition to bacterial accumulation and concentration of REEs, biological REE binders, including proteins (lanmodulin, lanpepsy) and small molecules (metallophores and cofactors) have been identified that enable REE concentration and separation. REE‐binding proteins have also been used in several mechanistically distinct REE biosensors, which have potential application in mining and medicine. Notably, the role of REEs in biology has only been known for a decade, suggesting their considerable scope for developing new understanding and novel applications.

show abstract

Section: Physiological Role Of Rare Earth Elementsmentioning

confidence: 99%

Rare earth elements in biology: From biochemical curiosity to solutions for extractive industries

Rocha,

Alexandrov,

Scott

2024

Microbial Biotechnology

View full text Add to dashboard Cite

show abstract

“…A single colony of strain GM97 was picked on the methanol/La 3+ Hypho plate, and the strain was identified as Methylorubrum extorquens using the 16S rRNA gene sequence. Strain GM97 formed large colonies on a 1/100 nutrient plate with samarium (Sm 3+ ) ( 2 ). In this study, we report the M. extorquens strain GM97 genome sequence.…”

Section: Announcementmentioning

confidence: 99%

Genome Sequence of the Lanthanide-Responsive Methylotrophic Bacterium Methylorubrum extorquens Strain GM97

Nakamura

Mizuno

Shimada

et al. 2023

Microbiol Resour Announc

Self Cite

View full text Add to dashboard Cite

show abstract

“…Where L is the length of the cell (1 cm), A is the absorbance at 500 nm, ε is the average molar absorptivity of all bikaverin (6,456 L/mol.cm2), and concn is the concentration (mol/L) of pigment [10].…”

Section: B the Extraction And Calculation Of Bikaverin Pigmentmentioning

confidence: 99%

“…In the Potato dextrose broth, different carbon sources such as glucose, sucrose, mannose, maltose, galactose, and lactose were supplied independently to the final concentration of 2% (W/V) (PDB). The Bikaverin pigment was measured after the appropriate incubation period [10].…”

Section: The Effect Of Carbon Sourcementioning

confidence: 99%

Study The Improvement Myco-manufacturing of Crud Bikaverin by Fusarium oxysporum with Evaluation The Antimicrobial Effectiveness

Mohammed¹

2023

UTJsci

View full text Add to dashboard Cite

Bikaverin is a reddish pigment produced by a variety of fungal species, the majority of which belong to the Fusarium genus. This pigment has antibiotic activities against protozoa, bacteria, and fungus. This study looked at the toxicity of Bikaverin to some microbes, production, and characterization of the pigment from the fungus Fusarium oxysporum. The yield of total bikaverin in F. oxysporum shake flask culture was improved by optimizing cultivation variables such as complex medium, carbon supply, nitrogen source, temperature, medium pH, and incubation period. The maximum production of complete bikaverin was found after 10 days at 28°C in Potato dextrose broth [PDB] supplemented with 2% glucose, 2% corn step liquor, and a pH of 5.5. The isolates of more sensitive bacteria to bikaverin were Staphylococcus aureus and S. typhi, with inhibition zones 24 and 23 mm respectively, at a concentration of 75 ?g/mL. The isolates more sensitive fungi to bikaverin were E.faecalis, E. coli, C. albicans, and P. aeruginosa, with inhibition zones 18, 22, 20 and 13 mm, respectively, at concentrations of 75 ?g/mL. The study concluded that the toxic antimicrobial activity of bikaverin was against fungi and bacteria

show abstract

Discovery of lanthanide-dependent methylotrophy and screening methods for lanthanide-dependent methylotrophs

Cited by 5 publications

References 37 publications

Rare earth elements in biology: From biochemical curiosity to solutions for extractive industries

Rare earth elements in biology: From biochemical curiosity to solutions for extractive industries

Genome Sequence of the Lanthanide-Responsive Methylotrophic Bacterium Methylorubrum extorquens Strain GM97

Study The Improvement Myco-manufacturing of Crud Bikaverin by Fusarium oxysporum with Evaluation The Antimicrobial Effectiveness

Contact Info

Product

Resources

About