2018
DOI: 10.1038/s41598-018-25509-2
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Assessment of Microbial Community Structure and Function in Serially Passaged Wastewater Electro-Bioreactor Sludge: An Approach to Enhance Sludge Settleability

Abstract: Several studies have been carried out to understand bulking phenomena and the importance of environmental factors on sludge settling characteristics. The main objective of this study was to carry out functional characterization of microbial community structure of wastewater electro-bioreactor sludge as it undergoes serial passaging in the presence or absence of a current density over 15 days. Illumina MiSeq sequencing and QIIME were used to assess sludge microbial community shifts over time. (α) and (β) divers… Show more

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Cited by 39 publications
(17 citation statements)
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References 46 publications
(47 reference statements)
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“…Within each of these families, nearly all the sequencing reads belonged to the genera Pseudomonas, Flavobacterium, Chryseobacterium, and Pedobacter, respectively. It should be noted that the aforementioned taxonomic groups are among the most common readily culturable soil bacteria (Pseudomonas, Flavobacterium, and Pedobacter) [49] and have been found in soil rich in hydrocarbon pollutants (Pseudomonadaceae, Flavobacteriaceae, and Weeksellaceae) [50]. This taxonomic profiling seemed consistent with the environmental history of the soil, as the sample was obtained from a site notorious for its past coal and oil mining industry [personal communication].…”
Section: Bias Introduced By the Staining Processmentioning
confidence: 69%
“…Within each of these families, nearly all the sequencing reads belonged to the genera Pseudomonas, Flavobacterium, Chryseobacterium, and Pedobacter, respectively. It should be noted that the aforementioned taxonomic groups are among the most common readily culturable soil bacteria (Pseudomonas, Flavobacterium, and Pedobacter) [49] and have been found in soil rich in hydrocarbon pollutants (Pseudomonadaceae, Flavobacteriaceae, and Weeksellaceae) [50]. This taxonomic profiling seemed consistent with the environmental history of the soil, as the sample was obtained from a site notorious for its past coal and oil mining industry [personal communication].…”
Section: Bias Introduced By the Staining Processmentioning
confidence: 69%
“…However, for a more in-depth understanding of the microbial communities involved, Illumina sequencing should be done to identify the shift in microbial community of the CO/syngas fermenting microorganisms (Elnaker et al, 2018).…”
Section: Recovery Of Alcohols By a Co-polymeric Gelmentioning
confidence: 99%
“…Bacteria constitute the microbial ecosystem in and around our body and also in the environment with immense diversity and complexity . Classification of bacteria is the fundamental first step for bacterial taxonomy determination and is mainly based on the differences in cellular composition, cellular metabolism, and cellular structure.…”
Section: Figurementioning
confidence: 99%
“…[1][2][3][4] Classification of bacteria is the fundamental first step for bacterial taxonomy determination and is mainly based on the differences in cellular composition, cellular metabolism, and cellular structure.G enetic analysis approaches,such as PCR (polymerase chain reaction), [5] FISH (fluorescence in situ hybridization), [6] and NGS (next generation sequencing) [7,8] are powerful techniques for the identification of bacteria, but these are often inappropriate in clinical diagnosis and wastewater treatment, which require ar apid diagnosis and in situ monitoring, due to the heavy preparative work and the huge amount of data required for in-depth analysis . Gram staining has been the gold standard technique for bacterial classification based on the different physical properties of the bacterial cell-wall structure. [1][2][3][4] Classification of bacteria is the fundamental first step for bacterial taxonomy determination and is mainly based on the differences in cellular composition, cellular metabolism, and cellular structure.G enetic analysis approaches,such as PCR (polymerase chain reaction), [5] FISH (fluorescence in situ hybridization), [6] and NGS (next generation sequencing) [7,8] are powerful techniques for the identification of bacteria, but these are often inappropriate in clinical diagnosis and wastewater treatment, which require ar apid diagnosis and in situ monitoring, due to the heavy preparative work and the huge amount of data required for in-depth analysis . Gram staining has been the gold standard technique for bacterial classification based on the different physical properties of the bacterial cell-wall structure.…”
mentioning
confidence: 99%