ND S .Q . S U N. 1998. Spore germination of Bacillus stearothermophilus was progressively inhibited as the concentrations of sodium bicarbonate (NaHCO 3 ) in the germination media increased from 0% to 1·0% (w/v). The inhibitory effect of NaHCO 3 was attributed to the release of HCO − 3 and its alkaline properties, each of which played a different role. At low concentrations (³ 0·3%), the inhibitory effect of NaHCO 3 was mainly due to bicarbonate. As NaHCO 3 increased from 0·3% to higher concentrations, the effect of HCO − 3 reached a plateau while the alkalinating effect became the more dominant inhibitory factor. Fourier transform infrared (FTIR) analysis reveals that sodium bicarbonate reacted with the carboxyl group (1570 cm −1 ) of some acidic amino-acid residues of protein in the spore, leading to a less orientated structure. A shift of two units towards the longer frequency for carboxyl groups indicates that a stronger interaction was formed between the carboxyl group and the Na ¦ ion. The largest ratio of peak height between the absorbance of carboxylate (1570 cm −1 ) and of amide II (1546 cm −1 ) of spores after pretreatment with 0·3% sodium bicarbonate reflects the biggest structural alterations of keratin-like proteins in the spore. The role of NaHCO 3 in enhancing the sporicidal effect of glutaraldehyde is discussed.