A cytotaxonomic study of Vicia L. (Fabaceae) in Korea

Nam, Bo Mi; Park, Myung Soon; Oh, Byoung Un; Chung, Gyu Young

doi:10.11110/kjpt.2012.42.4.307

Cited by 5 publications

(2 citation statements)

References 18 publications

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“…Several morphological and DNA-based descriptors (e.g., consensus chloroplast simple sequence repeats (ccSSRs) [ 21 ]) of diversity have been used to discriminate amongst species in the Vicia genus. Morphological characteristics, such as flower traits, pollen morphology, leaf structure, and legume shape, have been considered to be important taxonomic traits for correct species identification in the genus [ 17 , 22 , 23 , 24 , 25 ]. Nevertheless, phenotypic identifications require specialized taxonomic expertise and a detailed description of species morphology at various developmental stages.…”

Section: Introductionmentioning

confidence: 99%

DNA-Based Identification of Eurasian Vicia Species Using Chloroplast and Nuclear DNA Barcodes

Bosmali

Lagiotis

Haider

et al. 2022

Plants

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Many legume species of the Vicia L. genus (Fabaceae Lindl.) are key components of the Mediterranean diet and have an integral role in sustainable agriculture. Given the importance of the Vicia species for Eurasian culture, it is necessary to implement methodologies, such as DNA barcoding, that can enable the effective authentication and identification of species in the genus. In this study, we analysed the chloroplast trnL and rpoC1, as well as the nuclear ITS2 DNA barcoding regions, to identify 71 Vicia specimens of Eurasian descent. Both the trnL and ITS2 regions were highly effective in discriminating the analysed taxa, while the more conserved rpoC1 region could not identify all of the selected species due to high sequence conservation or non-annotated or absent rpoC1 species sequences in GenBank. A dendrographic representation of the generated trnL data showed sufficient clustering for most of the analysed taxa, although some topological discrepancies were observed. ITS2 and rpoC1 reconstructions were also used for resolving the topological discrepancies observed in the trnL tree. Our analysis suggests that a combination of DNA barcoding regions is essential for accurate species discrimination within the Vicia genus, while single-locus analyses do not provide the necessary resolution.

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Section: Introductionmentioning

confidence: 99%

DNA-Based Identification of Eurasian Vicia Species Using Chloroplast and Nuclear DNA Barcodes

Bosmali

Lagiotis

Haider

et al. 2022

Plants

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“…Uncertainty in the number of endemic species may have resulted from the taxonomic ambiguity of V. hirticalycina Nakai and V. anguste‐pinnata Nakai, which are endemic to the southern region of the Korean Peninsula. Plants of V. hirticalycina are diploid (Nam et al., ) perennial herbs that prefer shady, humid sites in Korean mountain valleys (National Institute of Biological Resources, ). Vicia anguste‐pinnata was first separated from V. hirticalycina by Nakai () based mainly on leaflet size, plant height, and number of flower characteristics.…”

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confidence: 99%

Development of 16 microsatellite markers for the Korean endemic Vicia hirticalycina (Fabaceae)

Park

Choi

2018

Appl Plant Sci

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Premise of the Study Vicia hirticalycina (Fabaceae) is a narrowly endemic species restricted to mountain valleys of southern Korea. To investigate its fine‐scale genetic diversity and differentiation in Korea, we developed polymorphic microsatellite markers.Methods and ResultsSixteen polymorphic microsatellite markers were developed from Illumina MiSeq data. In 74 individual plants from four populations, one to seven alleles were expressed for each locus. The levels of observed and expected heterozygosity ranged from 0.000 to 0.778 and from 0.000 to 0.738, respectively. Cross‐amplification was conducted with three related species and seven to 11 markers were successfully amplified.ConclusionsThese new microsatellite markers will be useful in future studies on the population genetics of V. hirticalycina.

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Elucidating karyological and agro-morphological characteristics of Vicia cassia boiss. and V. aintabensis Boiss. & Hausskn

Keleş,

Tiryaki

2024

Genet Resour Crop Evol

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This study aimed to determine the karyological characteristics, DNA content, and agro-morphological plant characteristics of Vicia cassia Boiss. and Vicia aintabensis Boiss. & Hausskn. collected from natural flora of Turkiye. The results were also compared with those of Vicia sativa. The main stem length, the numbers of main stem branches per plant, the number of leaves of main stem, the number of leaflets per leaf, the number of grains per pod, the pod width and length as well as thousand seed weight characteristics showed significant variation across the species, with the exception of 50% inflorescences (p < 0.4987) and natural plant heights (p < 0.3276). Karyotype formulas of Vicia cassia, V. aintabensis and V. sativa were determined as 2n = 2x = 14 = 3 m + 1tsat + 1sm + 2t, 2n = 2x = 14 = 1sm + 4st + 2t, and 2n = 2x = 12 = 5st + 1 m, respectively. The genome size of V. aintabensis (17,227.47 Mbp) was 5.26 and 5.01 times larger than V. cassia (3273.85 Mbp) and V. sativa (3435.22 Mpb), respectively. The importance of the karyomorphological data was also evaluated with the morphological evidences.

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A cytotaxonomic study of Vicia L. (Fabaceae) in Korea

Cited by 5 publications

References 18 publications

DNA-Based Identification of Eurasian Vicia Species Using Chloroplast and Nuclear DNA Barcodes

DNA-Based Identification of Eurasian Vicia Species Using Chloroplast and Nuclear DNA Barcodes

Development of 16 microsatellite markers for the Korean endemic Vicia hirticalycina (Fabaceae)

Elucidating karyological and agro-morphological characteristics of Vicia cassia boiss. and V. aintabensis Boiss. & Hausskn

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