Optical spectra of two families of symmetrical polymethine dyes, bearing a positive and a negative charge, are analyzed based on an essential-state model recently developed for quadrupolar dyes. The model accounts for molecular vibrations and polar solvation and reproduces the anomalous evolution with solvent polarity of experimental absorption band shapes. Fluorescence and excited-state absorption spectra are well-described within the same model, which also quantitatively reproduces the recent observation of an intense two-photon absorption toward the (two-photon forbidden) lowest excited state. An extensive analysis of optical spectra demonstrates that the essential-state model developed for quadrupolar dyes also applies to polymethine dyes and that long polymethine dyes offer the first experimental example of class III quadrupolar chromophores.

Can polarity-sensitive fluorescent dyes monitor the response of live cells to fundamental stress conditions, such as deprivation from nutrition and oxidative stress? To address this question, we developed a push-pull dioxaborine probe (DXB-NIR) for biomembranes and lipid droplets featuring strong solvatochromism in far-red to near-infrared region, high fluorescence brightness, photostability and two-photon absorption cross section, reaching 13800 GM at 925 nm. In model membranes, DXB-NIR exhibits unprecedented 80-nm shift between liquid ordered and disordered membrane phases, allowing robust imaging of separated membrane microdomains. Two-color imaging of live cells with DXB-NIR enables polarity mapping in plasma membranes, endoplasmic reticulum and lipid droplets, which reveals that starvation and oxidative stress produce increase in the local polarity, and this change is different for each of the studied cell compartments. Thus, by pushing the limits of existing solvatochromic dyes, we introduce a concept of polarity mapping for monitoring the response of cells to stress. TOC entry We developed a solvatochromic near-infrared dye based on push-pull dioxaborine and introduced a polarity mapping concept for monitoring cell stress.

Stepwise modification of the methyl groups at the α positions of BODIPY 1 was used for preparation of a series of mono- (2, 4, and 6) and diferrocene (3) substituted donor-acceptor dyads in which the organometallic substituents are fully conjugated with the BODIPY π system. All donor-acceptor complexes have strong absorption in the NIR region and quenched steady-state fluorescence, which can be partially restored upon oxidation of organometallic group(s). X-ray crystallography of complexes 2-4 and 6 confirms the nearly coplanar arrangement of the ferrocene groups and the BODIPY π system. Redox properties of the target systems were studied using cyclic voltammetry (CV) and differential pulse voltammetry (DPV). It was found that the first oxidation process in all dyads is ferrocene centered, while the separation between the first and the second ferrocene-centered oxidation potentials in diferrocenyl-containing dyad 3 is ∼150 mV. The density functional theory-polarized continuum model (DFT-PCM) and time-dependent (TD) DFT-PCM methods were used to investigate the electronic structure as well as explain the UV-vis and redox properties of organometallic compounds 2-4 and 6. TDDFT calculations allow for assignment of the charge-transfer and π → π* transitions in the target compounds. The excited state dynamics of the parent BODIPY 1 and dyads 2-4 and 6 were investigated using time-resolved transient spectroscopy. In all organometallic dyads 2-4 and 6 the initially excited state is rapidly quenched by electron transfer from the ferrocene ligand. The lifetime of the charge-separated state was found to be between 136 and 260 ps and demonstrates a systematic dependence on the electronic structure and geometry of BODIPYs 2-4 and 6.

Fluorescent solvatochromic dyes and molecular rotors increase their popularity as fluorogenic probes for background-free detection of biomolecules in cellulo in no-wash conditions. Here, we introduce a push-pull boron-containing (dioxaborine) dye that presents unique spectroscopic behavior combining solvatochromism and molecular rotor properties. Indeed, in organic solvents, it shows strong red shifts in the absorption and fluorescence spectra upon increase in solvent polarity, typical for push-pull dyes. On the other hand, in polar solvents, where it probably undergoes Twisted Intramolecular Charge Transfer (TICT), the dye displays strong dependence of its quantum yield on solvent viscosity, in accordance to Förster-Hoffmann equation. In comparison to solvatochromic and molecular rotor dyes, dioxaborine derivative shows exceptional extinction coefficient (120,000 M -1 cm -1 ), high fluorescence quantum yields and red/far-red operating spectral range. It also displays much higher photostability in apolar media as compared to Nile Red, a fluorogenic dye of similar color. Its reactive carboxy derivative has been successfully grafted to carbetocin, a ligand of the oxytocin G protein-coupled receptor. This conjugate exhibits >1000-fold turn on between apolar 1,4-dioxane and water. It targets specifically the oxytocin receptor at the cell surface, which enables receptor imaging with excellent signal-to-background ratio (>130). We believe that presented push-pull dioxaborine dye opens a new page in the development of fluorogenic probes for bioimaging applications.

We present an experimental and theoretical investigation of the linear and nonlinear optical properties of a series of acceptor-pi-acceptor symmetrical anionic polymethine dyes with diethylamino-coumarin-dioxaborine terminal groups and different conjugation lengths. Two-photon absorption (2PA) cross sections (delta(2PA)) are enhanced with an increase of pi-conjugation length in the investigated series of dyes. 2PA spectra for all dyes consist of two well-separated bands. The first band, located within the telecommunications window, occurs upon two-photon excitation into the vibrational levels of the main S(0) --> S(1) transition, reaching a large delta(2PA) = 2200 GM (1 GM = 1 x 10(-50) cm(4) s/photon) at 1600 nm for the longest conjugated dye. The position of the second, and strongest, 2PA band for all anionic molecules corresponds to the second-excited final state, which is confirmed by quantum-chemical calculations and excitation anisotropy measurements. Large delta(2PA) values up to 17,000 GM at 1100 nm are explained by the combination of the large ground- and excited-state transition dipole moments. The three shortest dyes show good photochemical stability and surprisingly large fluorescence quantum yields of approximately 0.90, approximately 0.66, and approximately 0.18 at the red to near-IR region of approximately 640, approximately 730, and approximately 840 nm, respectively. The excited-state absorption spectra for all samples are also studied and exhibit intense bands throughout the visible wavelength region with peak cross section close to 5 x 10(-16) cm(2) with a corresponding red shift with increasing conjugation lengths.

A detailed experimental and theoretical study of the linear and nonlinear absorption of a series of asymmetrical D-p-A cyanine dyes with the same trimethylindolin donor (D) and diethylaminocoumarin-dioxaborine acceptor (A) terminal groups and different conjugation lengths, is presented. Strong solvatochromic behavior affecting the fluorescence quantum yields, lifetimes, and the linear and nonlinear absorption properties is observed due to the presence of permanent ground state dipole moments. Detailed experimental studies of lifetime dynamics are performed by direct time-correlated single photon counting and pump-probe techniques. We find that an increase in p-conjugation in the investigated series of dyes leads to an enhancement of the excited-state absorption and two-photon absorption (2PA) cross-sections (d 2PA ). The 2PA spectra for all of the investigated dyes consist of two well-separated bands. The first band occurs at two-photon excitation into the vibrational levels and not into the absorption peak of the main transition, S 0 / S 1 , which is more typical of that observed for symmetrical cyanines. The position of the second 2PA band for all the molecules remains unchanged in solvents of different polarity contrary to the large solvatochromic shift of the S 0 / S 1 band, resulting in a large intermediate state resonance enhancement and, therefore, a larger 2PA in acetronitrile (d 2PA z 10000 GM) compared to toluene (d 2PA z 4700 GM). Experimental methods and results Materials characterization and linear spectroscopic propertiesThe molecular structures of the dyes studied in this paper are shown in the inset of Fig. 1a-c. Their chemical names are:

The two-photon absorption (2PA) spectrum of an organic single crystal is reported. The crystal is grown by self-nucleation of a subsaturated hot solution of acetonitrile, and is composed of an asymmetrical donor-π-acceptor cyanine-like dye molecule. To our knowledge, this is the first report of the 2PA spectrum of single crystals made from a cyanine-like dye. The linear and nonlinear properties of the single crystalline material are investigated and compared with the molecular properties of a toluene solution of its monomeric form. The maximum polarization-dependent 2PA coefficient of the single crystal is 52 ± 9 cm/GW, which is more than twice as large as that for the inorganic semiconductor CdTe with a similar absorption edge. The optical properties, linear and nonlinear, are strongly dependent upon incident polarization due to anisotropic molecular packing. X-ray diffraction analysis shows π-stacking dimers formation in the crystal, similar to H-aggregates. Quantum chemical calculations demonstrate that this dimerization leads to the splitting of the energy bands and the appearance of new red-shifted 2PA bands when compared to the solution of monomers. This trend is opposite to the blue shift in the linear absorption spectra upon H-aggregation.

Diferrocene-containing meso-cyano-BODIPY (4) was prepared by the direct cyanation/oxidation reaction of symmetric BODIPY 1 followed by Knoevenagel condensation with ferrocenealdehyde. Ferrocene-containing BODIPY 4 was characterized by a variety of spectroscopic, electrochemical, and theoretical methods and its UV-Vis-NIR spectrum has a striking similarity with a UV-Vis-NIR spectrum of the previously reported magnesium 2(3),7(8),12(13),17(18)-tetracyano-3(2),8(7),13(12),18(17)-tetraferrocenyl-5,10,15,20-tetraazaporphyrin.