The properties of the hydrated amorphous polyamide (PA) membrane and its binding with alginate are investigated through molecular dynamics simulations. The density of the hydrated membrane, surface morphology, and water diffusion near and inside the membrane are compared to other studies. Particular focus is given to the steered molecular dynamics (SMD) simulation of the binding between the PA membrane and an alginate model. The PA surface composition is determined on the basis of experimental measurements of the oxygen/nitrogen (O/N) ratio. The surface model is built using a configurational-bias Monte Carlo technique. The consistent valence force field (CVFF) is used to describe the atomic interactions in the membrane-foulant system. Simulation results show that the carboxylate groups in both the PA surface and alginate exhibit strong binding with metal ions. This binding mechanism plays a major role in the PA-alginate fouling through the formation of an ionic binding bridge. Specifically, Ca(2+) ions have stronger binding with the carboxylate group than Na(+) ions, while the binding breakdown time is shorter for Ca(2+) than Na(+) because of the comparably higher hydration free energy of Ca(2+) ions with water molecules.

We perform molecular dynamics (MD) simulations to investigate the cross-linked polyamide (PA) membrane, the aggregation of alginate molecules in the presence of Ca(2+) ions, and their molecular binding mechanism in aqueous solution. We use a steered molecular dynamics (SMD) approach to simulate the unbinding process between a PA membrane and an alginate gel complex. Simulation results show that Ca(2+) ions are strongly associated with the carboxylate groups in alginate molecules, forming a web structure. The adhesion force between alginate gel and PA surface during unbinding originates from several important molecular interactions. These include the short-range hydrogen bonding and van der Waals attraction forces, and the ionic bridge binding that extends much longer pulling distances due to the significant chain deformations of alginate gel and PA membrane.

The structure and dynamics of water–methane fluids between clay surfaces are investigated through the grand-canonical Monte Carlo (GCMC) and molecular dynamics (MD) simulations. The chemical potentials of water and methane at the temperatures and pressures corresponding to different burial depths are calculated. These chemical potentials are used in the GCMC simulations to determine the water and methane contents in the clay interlayer at a burial depth of 6 km. The results are used as initial inputs for further MD simulations to investigate the static and dynamic properties of the confined fluid. Simulation results show that initial clay swelling is dominated by water adsorption into clay interlayer, followed by the formation of methane hydrates as the basal spacing increases. Methane content in clay is found to increase in a step fashion, from initial inner-sphere complex to both inner- and outer-sphere structures. It is found that methane is not fully coordinated by water molecules due to the low density of water content in Na-montmorillonite clay.

We carried out umbrella sampling and molecular dynamics (MD) simulations to investigate molecular interactions between sulfobetaine zwitterions or between sulfobetaine brushes in different media. Simulation results show that it is more energetically favorable for the two sulfobetaine zwitterions or brushes to be fully hydrated in aqueous solutions than in vacuum where strong ion pairs are formed. Structural properties of the hydrated sulfobetaine brush array and its antifouling behavior against a foulant gel are subsequently studied through steered MD simulations. We find that sulfobetaine brush arrays with different grafting densities have different structures and antifouling mechanisms. At a comparably higher grafting density, the sulfobetaine brush array exhibits a more organized structure which can hold a tightly bound hydration water layer at the interface. Compression of this hydration layer results in a strong repulsive force. However, at a comparably lower grafting density, the brush array exhibits a randomly oriented structure in which the antifouling of the brush array is through the deformation of the sulfobetaine branches.

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