Background: Lysine 2-hydroxyisobutyrylation (Khib), a newly identified post-translational modification, is known to regulate transcriptional activity in animals. However, extensive studies of the lysine 2-hydroxyisobutyrylome in plants and animals have yet to be performed. Results: In this study, using LC-MS/MS qualitative proteomics strategies, we identified 4163 Khib sites on 1596 modified proteins in rice (Oryza sativa) seedlings. Motif analysis revealed 10 conserved motifs flanking the Khib sites, and subcellular localization analysis revealed that 44% of the Khib proteins are localized in the chloroplast. Gene ontology function, KEGG pathway, and protein domain enrichment analyses revealed that Khib occurs on proteins involved in diverse biological processes and is especially enriched in carbon metabolism and photosynthesis. Among the modified proteins, 20 Khib sites were identified in histone H2A and H2B, while only one site was identified in histone H4. Protein-protein interaction (PPI) network analysis further demonstrated that Khib participates in diverse biological processes including ribosomal activity, biosynthesis of secondary metabolites, and metabolic pathways. In addition, a comparison of lysine 2-hydroxyisobutyrylation, acetylation, and crotonylation in the rice proteome showed that 45 proteins with only 26 common lysine sites are commonly modified by three PTMs. The crosstalk of modified sites and PPI among these PTMs may form a complex network with both similar and different regulatory mechanisms. Conclusions: In summary, our study comprehensively profiles the lysine 2-hydroxyisobutyrylome in rice and provides a better understanding of its biological functions in plants.

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This study investigated the effects of dietary supplementation with vitamin E (VE) on the growth performance, breast muscle quality, fatty acid (FA) composition, and muscle fiber characteristics of geese. In the present study, a total of 240 healthy 29‐day‐old male Jiangnan white geese were randomly divided into six experimental groups, with five replicates in each group and eight geese in each replicate. Group A, the control group, was fed a basal diet; Groups B, C, D, E, and F were fed diets supplemented with 5, 10, 20, 40, and 80 mg/kg VE. After feeding for 70 days of age, one gosling from each replicate was randomly selected and slaughtered to assess the breast muscle quality characteristics, lipid oxidation, FA composition, and muscle fiber characteristics. The results showed that dietary VE supplementation did not significantly affect the growth performance, breast muscle quality characteristics, or muscle fiber characteristics of geese (p > 0.05). Dietary supplementation with 20, 40, and 80 mg/kg VE significantly decreased the malondialdehyde (MDA) content of the breast muscle compared with the control group (P < 0.05). Dietary supplementation with 40 and 80 mg/kg VE significantly increased the retention of α‐tocopherol in pectoral muscle, decreased polyunsaturated fatty acid (PUFA) oxidation, and increased the proportion of n‐3 PUFAs (p < 0.05). In conclusion, dietary supplementation with 5–80 mg/kg VE to the basal diet (VE content of the basal diet: 17.53 mg/kg) had no significant effect on the growth performance of geese. However, dietary supplementation with 40–80 mg VE increased the retention of α‐tocopherol in breast muscle tissue, reduced the oxidation of PUFAs, and increased the content of n‐3 PUFAs. Thus, under these experimental conditions, dietary supplementation with 40–80 mg/kg VE is recommended, which is beneficial to human health. Practical Application Appropriate supplementation of VE could increase meat quality and the beneficial components in breast muscle of geese. It provides a theoretical basis for future production of high‐quality goose meat.