No abstract

This study provides the first HPA datasets for the selected Malay sub-ethnic groups. Subsequent analyses including previously reported HPA data of Malays, Chinese and Indians revealed details of the genetic relationships and ancestry of various sub-populations in Peninsular Malaysia. Furthermore, the comprehensive HPA allele frequency information from Peninsular Malaysia provided in this report has potential applications for future study of diseases, estimating risks associated with HPA alloimmunization and for developing an efficient HPA-typed donor recruitment strategy.

Human platelet antigens (HPAs) are polymorphic and immunogenic glycoproteins encoded by biallelic genes on human chromosome 17 (HPA-1 to -4 and HPA-6 to -11), chromosome 5 (HPA-5), and chromosome 6 (HPA-15) and expressed on the surface of platelets. In the present study, we typed seven HPA loci (HPA-1 to -6 and HPA-15) by polymerase chain reaction using sequence-specific primer and sequence-based typing in 166 blood samples representing three Orang Asli groups (Semang, Senoi, and Proto-Malays) that inhabit Peninsular Malaysia. Combined with previous HPA data collected for Malay subethnic groups, Malays, Chinese, and Indians, our analyses showed high genetic diversity in Peninsular Malaysia, which is consistent with multiple settlements of the region by several founding ancestors (Semang, Senoi, and Proto-Malays) in the last 50,000 years. The gene pools of these ancient populations were then further shaped by various evolutionary pressures such as repeated founder effects, natural selection, and admixture with the relatively recent arrivals such as Chinese, Indians, and Malay subethnic groups. Medical consequences of this genetic complexity are also discussed, including the risks of platelet alloimmunization associated with random platelet transfusion and gestation.