A considerable number of systems have recently been reported in which Brownian yet non-Gaussian dynamics was observed. These are processes characterised by a linear growth in time of the mean squared displacement, yet the probability density function of the particle displacement is distinctly non-Gaussian, and often of exponential (Laplace) shape. This apparently ubiquitous behaviour observed in very different physical systems has been interpreted as resulting from diffusion in inhomogeneous environments and mathematically represented through a variable, stochastic diffusion coefficient. Indeed different models describing a fluctuating diffusivity have been studied. Here we present a new view of the stochastic basis describing time-dependent random diffusivities within a broad spectrum of distributions. Concretely, our study is based on the very generic class of the generalised Gamma distribution. Two models for the particle spreading in such random diffusivity settings are studied. The first belongs to the class of generalised grey Brownian motion while the second follows from the idea of diffusing diffusivities. The two processes exhibit significant characteristics which reproduce experimental results from different biological and physical systems. We promote these two physical models for the description of stochastic particle motion in complex environments. uncovered anomalous diffusion of the power-law formwith the anomalous diffusion exponent 0<α<1 and the generalised diffusion coefficient D α [11], for the motion of charge carriers in amorphous semiconductors [12]. With the advance of modern microscopy techniques, in particular, superresolution microscopy, as well as massive progress in supercomputing, anomalous diffusion of the type (3) has been reported in numerous complex and biological systems [13,14]. Thus, subdiffusion with 0<α<1 was observed for submicron tracers in the crowded cytoplasm of biological cells [15][16][17][18][19] as well as in artificially crowded environments [20][21][22][23]. Further reports of subdiffusion come from the motion of proteins embedded in the membranes of living cells [24][25][26]. Subdiffusion is also seen in extensive simulations studies, for instance, of lipid bilayer membranes [27][28][29][30] and relative diffusion in proteins [31]. Superdiffusion, due to active motion of molecular motors, was observed in various biological cell types for both introduced and endogenous tracers [16,17,32,33].Most of the anomalous diffusion phenomena mentioned here belong to two main classes of anomalous diffusion: (i) the class of continuous time random walk processes, in which scale-free power-law waiting times in between motion events give rise to the law (3) [12,34], along with a stretched Gaussian displacement probability density G(x, t) [11,12,34] as well as weak ergodicity breaking and ageing [35,36]. We note that similar effects of non-Gaussianity, weak non-ergodicity, and ageing also occur in spatially heterogeneous diffusion processes [37][38][39][40]. (ii) The secon...
A standard approach to study time-dependent stochastic processes is the power spectral density (PSD), an ensemble-averaged property defined as the Fourier transform of the autocorrelation function of the process in the asymptotic limit of long observation times, T ¥. In many experimental situations one is able to garner only relatively few stochastic time series of finite T, such that practically neither an ensemble average nor the asymptotic limit T ¥ can be achieved. To accommodate for a meaningful analysis of such finite-length data we here develop the framework of single-trajectory spectral analysis for one of the standard models of anomalous diffusion, scaled Brownian motion. We demonstrate that the frequency dependence of the single-trajectory PSD is exactly the same as for standard Brownian motion, which may lead one to the erroneous conclusion that the observed motion is normal-diffusive. However, a distinctive feature is shown to be provided by the explicit dependence on the measurement time T, and this ageing phenomenon can be used to deduce the anomalous diffusion exponent. We also compare our results to the single-trajectory PSD behaviour of another standard anomalous diffusion process, fractional Brownian motion, and work out the commonalities and differences. Our results represent an important step in establishing singletrajectory PSDs as an alternative (or complement) to analyses based on the time-averaged mean squared displacement.
Stochastic models based on random diffusivities, such as the diffusing-diffusivity approach, are popular concepts for the description of non-Gaussian diffusion in heterogeneous media. Studies of these models typically focus on the moments and the displacement probability density function. Here we develop the complementary power spectral description for a broad class of random-diffusivity processes. In our approach we cater for typical single particle tracking data in which a small number of trajectories with finite duration are garnered. Apart from the diffusing-diffusivity model we study a range of previously unconsidered random-diffusivity processes, for which we obtain exact forms of the probability density function. These new processes are different versions of jump processes as well as functionals of Brownian motion. The resulting behaviour subtly depends on the specific model details. Thus, the central part of the probability density function may be Gaussian or non-Gaussian, and the tails may assume Gaussian, exponential, log-normal, or even power-law forms. For all these models we derive analytically the moment-generating function for the single-trajectory power spectral density. We establish the generic 1/f 2-scaling of the power spectral density as function of frequency in all cases. Moreover, we establish the probability density for the amplitudes of the random power spectral density of individual trajectories. The latter functions reflect the very specific properties of the different random-diffusivity models considered here. Our exact results are in excellent agreement with extensive numerical simulations.
The problem of biological motion is a very intriguing and topical issue. Many efforts are being focused on the development of novel modelling approaches for the description of anomalous diffusion in biological systems, such as the very complex and heterogeneous cell environment. Nevertheless, many questions are still open, such as the joint manifestation of statistical features in agreement with different models that can also be somewhat alternative to each other, e.g. continuous time random walk and fractional Brownian motion. To overcome these limitations, we propose a stochastic diffusion model with additive noise and linear friction force (linear Langevin equation), thus involving the explicit modelling of velocity dynamics. The complexity of the medium is parametrized via a population of intensity parameters (relaxation time and diffusivity of velocity), thus introducing an additional randomness, in addition to white noise, in the particle's dynamics. We prove that, for proper distributions of these parameters, we can get both Gaussian anomalous diffusion, fractional diffusion and its generalizations.
A rapidly increasing number of systems is identified in which the stochastic motion of tracer particles follows the Brownian law r 2 (t) ≃ Dt yet the distribution of particle displacements is strongly non-Gaussian. A central approach to describe this effect is the diffusing diffusivity (DD) model in which the diffusion coefficient itself is a stochastic quantity, mimicking heterogeneities of the environment encountered by the tracer particle on its path. We here quantify in terms of analytical and numerical approaches the first passage behaviour of the DD model. We observe significant modifications compared to Brownian-Gaussian diffusion, in particular that the DD model may have a more efficient first passage dynamics. Moreover we find a universal crossover point of the survival probability independent of the initial condition.
Anomalous-diffusion, the departure of the spreading dynamics of diffusing particles from the traditional law of Brownian-motion, is a signature feature of a large number of complex soft-matter and biological systems. Anomalous-diffusion emerges due to a variety of physical mechanisms, e.g., trapping interactions or the viscoelasticity of the environment. However, sometimes systems dynamics are erroneously claimed to be anomalous, despite the fact that the true motion is Brownian—or vice versa. This ambiguity in establishing whether the dynamics as normal or anomalous can have far-reaching consequences, e.g., in predictions for reaction- or relaxation-laws. Demonstrating that a system exhibits normal- or anomalous-diffusion is highly desirable for a vast host of applications. Here, we present a criterion for anomalous-diffusion based on the method of power-spectral analysis of single trajectories. The robustness of this criterion is studied for trajectories of fractional-Brownian-motion, a ubiquitous stochastic process for the description of anomalous-diffusion, in the presence of two types of measurement errors. In particular, we find that our criterion is very robust for subdiffusion. Various tests on surrogate data in absence or presence of additional positional noise demonstrate the efficacy of this method in practical contexts. Finally, we provide a proof-of-concept based on diverse experiments exhibiting both normal and anomalous-diffusion.
Complex systems are known to display anomalous diffusion, whose signature is a space/time scaling x ∼ t δ with δ = 1/2 in the Probability Density Function (PDF). Anomalous diffusion can emerge jointly with both Gaussian, e.g., fractional Brownian motion, and power-law decaying distributions, e.g., Lévy Flights (LFs) or Lévy Walks (LWs). LFs get anomalous scaling, but also infinite position variance and, being jumps of any size allowed even at short times, also infinite energy and discontinuous velocity. LWs are based on random trapping events, resemble a Lévy-type power-law distribution that is truncated in the large displacement range and have finite moments, finite energy and discontinuous velocity. However, both LFs and LWs cannot describe friction-diffusion processes and do not take into account the role of strong heterogeneity in many complex systems, such as biological transport in the crowded cell environment. We propose and discuss a model describing a Heterogeneous Ensemble of Brownian Particles (HEBP) based on a linear Langevin equation. We show that, for proper distributions of relaxation time and velocity diffusivity, the HEBP displays features similar to LWs, in particular power-law decaying PDF, longrange correlations and anomalous diffusion, at the same time keeping finite position moments and finite energy. The main differences between the HEBP model and two LWs are investigated, finding that, even if the PDFs are similar, they differ in three main aspects: (i) LWs are biscaling, while HEBP is monoscaling; (ii) a transition from anomalous (δ = 1/2) to normal (δ = 1/2) diffusion in the long-time regime; (iii) the power-law index of the position PDF and the space/time diffusion scaling are independent in the HEBP, while they both depend on the scaling of the inter-event time PDF in LWs. The HEBP model is derived from a friction-diffusion process, it has finite energy and it satisfies the fluctuation-dissipation theorem.
We consider an ensemble of Ornstein-Uhlenbeck processes featuring a population of relaxation times and a population of noise amplitudes that characterize the heterogeneity of the ensemble. We show that the centre-of-mass like variable corresponding to this ensemble is statistically equivalent to a process driven by a non-autonomous stochastic differential equation with timedependent drift and a white noise. In particular, the time scaling and the density function of such variable are driven by the population of timescales and of noise amplitudes, respectively. Moreover, we show that this variable is equivalent in distribution to a randomly-scaled Gaussian process, i.e., a process built by the product of a Gaussian process times a non-negative in- * dependent random variable. This last result establishes a connection with the so-called generalized gray Brownian motion and suggests application to model fractional anomalous diffusion in biological systems.
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