Greater and lesser spotted eagles (Aquila clanga, A. pomarina) are two closely related forest eagles overlapping in breeding range in east-central Europe. In recent years a number of mixed pairs have been observed, some of which fledged hybrid young. Here we use mitochondrial (control region) DNA sequences and AFLP markers to estimate genetic differentiation and possible gene flow between these species. In a sample of 83 individuals (61 pomarina, 20 clanga, 2 F1-hybrids) we found 30 mitochondrial haplotypes which, in a phylogenetic network, formed two distinct clusters differing on average by 3.0% sequence divergence. The two species were significantly differentiated both at the mitochondrial and nuclear (AFLP) genetic level. However, five individuals with pomarina phenotype possessed clanga-type mtDNA, suggesting occasional gene flow. Surprisingly, AFLP markers indicated that these ''mismatched'' birds (originating from Germany, E Poland and Latvia) were genetically intermediate between the samples of individuals in which mtDNA haplotype and phenotype agreed. This indicates that mismatched birds were either F1 or recent back-cross hybrids. Mitochondrial introgression was asymmetrical (no pomarina haplotype found in clanga so far), which may be due to assortative mating by size. Gene flow of nuclear markers was estimated to be about ten times stronger than for mtDNA, indicating a sex-bias in hybrid fertility in accordance with Haldane's rule. Hybridization between the two species may be more frequent and may occur much further west than hitherto assumed. This is supported by the recent discovery of a mixed pair producing at least one fledgling in NE Germany.

Hybridization is a significant threat for endangered species and could potentially even lead to their extinction. This concern applies to the globally vulnerable Greater Spotted Eagle Aquila clanga, a species that co-occurs, and potentially interbreeds, with the more common Lesser Spotted Eagle Aquila pomarina in a vast area of Eastern Europe. We applied single nucleotide polymorphism (SNP) and microsatellite markers in order to study hybridization and introgression in 14 European spotted eagle populations. We detected hybridization and/or introgression in all studied sympatric populations. In most regions, hybridization took place prevalently between A. pomarina males and A. clanga females, with introgression to the more common A. pomarina. However, such a pattern was not as obvious in regions where A. clanga is still numerous. In the course of 16 years of genetic monitoring of a mixed population in Estonia, we observed the abandonment of A. clanga breeding territories and the replacement of A. clanga pairs by A. pomarina, whereby on several occasions hybridization was an intermediate step before the disappearance of A. clanga. Although the total number of Estonian A. clanga ¥ A. pomarina pairs was twice as high as that of A. clanga pairs, the number of pairs recorded yearly were approximately equal, which suggests a higher turnover rate in interbreeding pairs. This study shows that interspecific introgressive hybridization occurs rather frequently in a hybrid zone at least 1700-km wide: it poses an additional threat for the vulnerable A. clanga, and may contribute to the extinction of its populations.

The ontogeny of migration routines used by wild birds remains unresolved. Here we investigated the migratory orientation of juvenile lesser spotted eagles (LSE; Clanga pomarina) based on translocation and satellite tracking. Between 2004 and 2016, 85 second-hatched juveniles (Abels) were reared in captivity for release into the declining German population, including 50 birds that were translocated 940 km from Latvia. In 2009, we tracked 12 translocated juveniles, as well as eight native juveniles and nine native adults, to determine how inexperienced birds come to use strategic migration routes. Native juveniles departed around the same time as the adults and six of eight used the eastern flyway around the Mediterranean, which was used by all adults. In contrast, translocated juveniles departed on average 6 days before native LSEs, and five travelled southward and died in the central Mediterranean region. Consequently, fewer translocated juveniles (4/12) than native juveniles (7/8) reached Africa. We conclude that juvenile LSEs have a much better chance of learning the strategic southeastern flyway if they leave at an appropriate time to connect with experienced elders upon departure. It is not clear why translocated juveniles departed so early. Regardless, by the end of the year, most juveniles had perished, whether they were translocated (10/12) or not (6/8). The small number of surviving translocated juveniles thus still represents a significant increase in the annual productivity of the German LSE population in 2009.

Cainism, nestling management in Germany in 2004-2007 and satellite tracking of juveniles in the Lesser Spotted Eagle (Aquila pomarina)The Lesser Spotted Eagle belongs to a species with obligatory cainism, which means that in the natural state it is rare that two young eagles fledge, although as a rule two chick's hatch. The breeding population in Germany is at the western edge of the species' range and is declining (a 23% decrease between 1993 and 2007). Local extinction can be anticipated and therefore nestling management has been implemented in the German federal state of Brandenburg since 2004 as a conservation measure by using human intervention to prevent the death of the younger sibling. This is in addition to other methods such as nest-site protection, habitat preservation, legislation etc. Furthermore, in 2007, second hatched eagle chicks (Abels) from Latvia were translocated for the first time. The managed pairs (nests physically inspected) were on average more successful than the unmanaged pairs (nests not physically inspected). It cannot be determined as to whether the inspection of the nests had a negative effect on breeding. Breeding success of the pairs present in Brandenburg, including non-breeders, increased by 57 % in 2007 due to nestling management, and that of the managed pairs alone by 67 %. In 2007 the behaviour of six young eagles was studied using satellite telemetry. This study determined that the Abels migrated as well as the first hatched eagle chicks (Cains), and that their survival chances were equally good. The Abels imported from Latvia migrated in two out of three cases along the same route as the German Lesser Spotted Eagles to the Bosporus. One Latvian Abel which fledged in Germany was tracked by satellite to Zambia where many Lesser Spotted Eagles winter. A German Abel wintered North of the Equator in the Sudan and neighbouring countries for over six months and started its return migration on 27 April 2008.

We assessed whether populations of the migratory, philopatric, territorial Lesser Spotted Eagle Clanga pomarina are regulated through territoriality and density‐dependent reproduction rates. In the north‐western part of the distribution to the east of the Baltic Sea, territories were spaced regularly and consistently between years. We did not find strong support for an improvement of reproductive output with an increase in distance to the nearest neighbour or with a decrease of the number of conspecifics within a 2‐km radius around nest‐sites. Eagles differed greatly in territory spacing across three studied geographical areas, but breeding performance did not follow the same pattern. Performance of birds at the northern limit of their distribution did not differ from that in an adjacent southern area. Moreover, breeding performance fluctuated synchronously across different geographical areas, perhaps indicating climatic spatial autocorrelation or trophic interactions with synchronous vole population fluctuations over large areas. Our data suggest population regulation through territoriality but do not identify density‐dependent breeding performance in this internationally protected raptor. Population density may be a good criterion for the selection of priority sites for conservation, but synchronous fluctuations in reproductive success over large geographical areas suggest that habitat conservation should similarly be focused at large scales.