Summary 1.Wildlife scientists continue to be interested in studying ways to quantify how the movements of animals are interdependent -dynamic interaction. While a number of applied studies of dynamic interaction exist, little is known about the comparative effectiveness and applicability of available methods used for quantifying interactions between animals. 2. We highlight the formulation, implementation and interpretation of a suite of eight currently available indices of dynamic interaction. Point-and path-based approaches are contrasted to demonstrate differences between methods and underlying assumptions on telemetry data. 3. Correlated and biased correlated random walks were simulated at a range of sampling resolutions to generate scenarios with dynamic interaction present and absent. We evaluate the effectiveness of each index at identifying different types of interactive behaviour at each sampling resolution. Each index is then applied to an empirical telemetry data set of three whitetailed deer (Odocoileus virginianus) dyads. 4. Results from the simulated data show that three indices of dynamic interaction reliant on statistical testing procedures are susceptible to Type I error, which increases at fine sampling resolutions. In the white-tailed deer examples, a recently developed index for quantifying local-level cohesive movement behaviour (the di index) provides revealing information on the presence of infrequent and varying interactions in space and time. 5. Point-based approaches implemented with finely sampled telemetry data overestimate the presence of interactions (Type I errors). Indices producing only a single global statistic (7 of the 8 indices) are unable to quantify infrequent and varying interactions through time. The quantification of infrequent and variable interactive behaviour has important implications for the spread of disease and the prevalence of social behaviour in wildlife. Guidelines are presented to inform researchers wishing to study dynamic interaction patterns in their own telemetry data sets. Finally, we make our code openly available, in the statistical software R, for computing each index of dynamic interaction presented herein.
Hot spots are typically locations of abundant phenomena. In ecology, hot spots are often detected with a spatially global threshold, where a value for a given observation is compared with all values in a data set. When spatial relationships are important, spatially local definitions Á those that compare the value for a given observation with locations in the vicinity, or the neighbourhood of the observation Á provide a more explicit consideration of space. Here we outline spatial methods for hot spot detection: kernel estimation and local measures of spatial autocorrelation. To demonstrate these approaches, hot spots are detected in landscape level data on the magnitude of mountain pine beetle infestations. Using kernel estimators, we explore how selection of the neighbourhood size (t) and hot spot threshold impact hot spot detection. We found that as t increases, hot spots are larger and fewer; as the hot spot threshold increases, hot spots become larger and more plentiful and hot spots will reflect coarser scale spatial processes. The impact of spatial neighbourhood definitions on the delineation of hot spots identified with local measures of spatial autocorrelation was also investigated. In general, the larger the spatial neighbourhood used for analysis, the larger the area, or greater the number of areas, identified as hot spots.
Cycling volumes are necessary to understand what influences ridership and are essential for safety studies. Traditional methods of data collection are expensive, time consuming, and lack spatial and temporal detail. New sources have emerged as a result of crowdsourced data from fitness apps, allowing cyclists to track routes using GPS enabled cell phones. Our goal is to determine if crowdsourced data from fitness apps data can be used to quantify and map the spatial and temporal variation of ridership. Using data provided by Strava.com, we quantify how well crowdsourced fitness app data represent ridership through comparison with manual cycling counts in Victoria, British Columbia. Comparisons are made for hourly, AM and PM peak, and peak period totals that are separated by season. Using Geographic Information Systems (GIS) and a Generalized Linear Model we modelled the relationships between crowdsourced data from Strava and manual counts and predicted categories of ridership into low, medium, and high for all roadways in Victoria. Our results indicate a linear association (r 2 0.40 to 0.58) between crowdsourced data volumes and manual counts, with one crowdsourced data cyclist representing 51 riders. Categorical cycling volumes were predicted and mapped using data on slope, traffic speeds, on street parking, time of year, and crowdsourced ridership with a predictive accuracy of 62%. Crowdsourced fitness data are a biased sample of ridership, however, in urban areas the high temporal and spatial resolution of data can predict categories of ridership and map spatial variation. Crowdsourced fitness apps offer a new source of data for transportation planning and can increase the spatial and temporal resolution of official count programs.
A review of some methods for analysis of space-time disease surveillance data is presented. Increasingly, surveillance systems are capturing spatial and temporal data on disease and health outcomes in a variety of public health contexts. A vast and growing suite of methods exists for detection of outbreaks and trends in surveillance data and the selection of appropriate methods in a given surveillance context is not always clear. While most reviews of methods focus on algorithm performance, in practice, a variety of factors determine what methods are appropriate for surveillance. In this review, we focus on the role of contextual factors such as scale, scope, surveillance objective, disease characteristics, and technical issues in relation to commonly used approaches to surveillance. Methods are classified as testing-based or model-based approaches. Reviewing methods in the context of factors other than algorithm performance highlights important aspects of implementing and selecting appropriate disease surveillance methods.
The collection, visualization, and analysis of movement data is at the forefront of geographic information science research. Movement data are generally collected by recording an object's spatial location (e.g., XY coordinates) at discrete time intervals. Methods for extracting useful information, for example space-time patterns, from these increasingly large and detailed datasets have lagged behind the technology for generating them. In this article we review existing quantitative methods for analyzing movement data. The objective of this article is to provide a synthesis of the existing literature on quantitative analysis of movement data while identifying those techniques that have merit with novel datasets. Seven classes of methods are identified: 1) time geography, 2) path descriptors, 3) similarity indices, 4) pattern and cluster methods, 5) individual-group dynamics, 6) spatial field methods, and 7) spatial range methods. Challenges routinely faced in quantitative analysis of movement data include difficulties with handling space and time attributes together, representing time in GIS, and using classic statistical testing procedures with space-time movement data. Areas for future research include: investigating equivalent distance comparisons in space and time, measuring interactions between moving objects, development of predictive frameworks for movement data, integrating movement data with existing geographic layers, and incorporating theory from time geography into movement models. In conclusion, quantitative analysis of movement data is an active research area with tremendous opportunity for new developments and methods.
Because many infectious diseases are emerging in animals in low-income and middle-income countries, surveillance of animal health in these areas may be needed for forecasting disease risks to humans. We present an overview of a mobile phone–based frontline surveillance system developed and implemented in Sri Lanka. Field veterinarians reported animal health information by using mobile phones. Submissions increased steadily over 9 months, with ≈4,000 interactions between field veterinarians and reports on the animal population received by the system. Development of human resources and increased communication between local stakeholders (groups and persons whose actions are affected by emerging infectious diseases and animal health) were instrumental for successful implementation. The primary lesson learned was that mobile phone–based surveillance of animal populations is acceptable and feasible in lower-resource settings. However, any system implementation plan must consider the time needed to garner support for novel surveillance methods among users and stakeholders.
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