Aim: A longitudinal study was conducted to assess the epidemiology of common gastrointestinal parasite (GIP) infections affecting goats in South Africa as influenced by agro-ecological zone (AEZ), sampling season, and the age and sex of animals. Materials and Methods: A total of 288 goats (101 male and 187 female) were randomly sampled during winter and summer in areas representing four AEZs (arid: 80; semi-arid: 76; humid: 62; and dry sub-humid: 70) of South Africa. Fecal samples from each animal were collected from the rectum, and the presence of GIP eggs was determined using a modified McMaster technique. A sample was considered positive when a minimum of one GIP egg was detected under the microscope. Fecal cultures were prepared, and infective larvae were collected and identified. The data were analyzed by MiniTab17 (2017) using the FREQ procedure, and the association between the independent factors and the prevalence of various GIPs were evaluated using the Pearson Chi-square test (p<0.05). Results: The overall prevalence of GIP in the present study was 37.1%, with a mean prevalence of 30.0, 26.4, 31.1, 36.6, and 59.6% for Eimeria spp., Trichuris, Strongyloides papillosus, Moniezia spp., and strongyles, respectively. There was a significant (p<0.05) association between the prevalence of strongyles, Trichuris, Moniezia spp., and AEZs, whereas an insignificant (p>0.05) association was observed for the prevalence of Eimeria spp. and S. papillosus. A significant (p<0.05) association between goat age and prevalence of all GIPs was observed, where the prevalence was higher in young goats, followed by adults, and then by suckling goats. The prevalence of various GIPs was similar between male and female goats. The percentage of infection with Eimeria spp., Trichuris, S. papillosus, and strongyle parasitic infections was marginally higher in males than in females, whereas that of the Moniezia spp. was higher in females. A significant (p<0.05) association between the prevalence of Eimeria spp. and sampling season was observed, and there was an insignificant (p>0.05) association between the other GIPs and sampling season. The prevalence of Eimeria spp. infection was higher in winter (34.0%) than in summer (26.0%). Conclusion: AEZs and goat age are the most important risk factors influencing GIP infections in South African communal goats. These epidemiological parameters are important for outlining effective parasite control management systems against these GIPs in goats.

The study was conducted to determine the effect of agro-ecological zone, season of birth and sex on Nguni calves’ pre-weaning performance. Production indices such as birth weight (BW), weaning weight (WW), pre-weaning average daily gain (P-ADG) and pre-weaning gain (P-WG) were assessed in the different agro-ecological zones. Herd records on performance of 826 Nguni calves’ from nine Nguni herds representing different agro-ecological zones: arid zone (n = 217); semi-arid zone (n = 296); dry sub-humid zone (n = 118) and humid zone (n = 195) were used for the analysis of pre-weaning calf performance. General linear model (GLM) procedure of SAS (2013) was used to analyse data, whereas mean separation was conducted using Tukey’s HSD test. Agro-ecological zone had a great influence (P < 0.01) on performance levels arising from pasture conditions which were dependent on rain, temperature, topography and soil type. Fluctuations in WW, P-ADG and P-WG performance across agro-ecological zones depicted the sensitivity of Nguni calves’ to postnatal stress. Calves’ in humid zone had higher performance with 121.21 kg for WW, 96.83 kg for P-WG and 0.477 kg/day for P-ADG. The lowest WW (114.51 kg), P-WG (89.98 kg) and P-ADG (0.438 kg/day) were observed in arid zone. Male calves were heavier at weaning (128.18 kg), P-ADG (0.503 kg/day) and total gain (103.03 kg); however, similar BW of 25 kg was observed for both male and female calves. Season had a significant (P < 0.05) effect on BW, P-ADG and P-WG. The P-ADG was 0.461 kg/day for calves born in summer and 0.449 kg/day for calves born in winter season. Calves born in summer gained 94.69 kg and calves born in winter gained 92.10 kg. Summer calves gained 2.59 kg more than winter calves. Summer heifer calves performed poorly whilst summer male calves outperformed heifer calves in terms of WW, P-WG and P-ADG. Pre-weaned calves in humid zone outperformed all calves in other agro-ecological zones. It was concluded that acceptable levels of growth are achievable from Nguni cattle under the different agro-ecological zones of Limpopo province, South Africa.

Genome-wide assessments of the genetic landscape of Farm Animal Genetic Resources (FAnGR) are key to developing sustainable breed improvements. Understanding the FAnGR adaptation to different environments and supporting their conservation programs from community initiative to national policymakers is very important. The objective of the study was to investigate the genetic diversity and population structure of communal indigenous goat populations from four provinces of South Africa. Communal indigenous goat populations from the Free State (FS) (n = 24), Gauteng (GP) (n = 28), Limpopo (LP) (n = 30), and North West (NW) (n = 35) provinces were genotyped using the Illumina Goats SNP50 BeadChip. An Illumina Goats SNP50 BeadChip data from commercial meat-type breeds: Boer (n = 33), Kalahari Red (n = 40), and Savanna (n = 31) was used in this study as reference populations. The Ho revealed that the genetic diversity of a population ranged between 0.39 ± 0.11 Ho in LP to 0.42 ± 0.09 Ho in NW. Analysis of molecular variance revealed variations of 3.39% (p < 0.0001) and 90.64% among and within populations, respectively. The first two Principal Component Analyses (PCAs) revealed a unique Limpopo population separated from GP, FS, and NW communal indigenous goat populations with high levels of admixture with commercial goat populations. There were unique populations of Kalahari and Savanna that were observed and admixed individuals. Marker FST (Limpopo versus commercial goat populations) revealed 442 outlier single nucleotide polymorphisms (SNPs) across all chromosomes, and the SNP with the highest FST value (FST = 0.72; chromosome 8) was located on the UHRF2 gene. Population differentiation tests (PCAdapt) revealed PC2 as optimal and five outlier SNPs were detected on chromosomes 10, 15, 20, and 21. The study revealed that the SNPs identified by the first two principal components show high FST values in LP communal goat populations and allowed us to identify candidate genes which can be used in the development of breed selection programs to improve this unique LP population and other communal goat population of FS, GP, and NW, and find genetic factors contributing to the adaptation to harsh environments. Effective management and utilization of South African communal indigenous goat populations is important, and effort should be made to maintain unique genetic resources for conservation.

In recent years, diseases caused by pathogenic bacteria have profoundly impacted chicken production by causing economic loss in chicken products and by-product revenues. MBL (mannose-binding lectin) is part of the innate immune system (IIS), which is the host’s first line defense against pathogens. The IIS functions centrally by identifying pathogen-specific microorganism-associated molecular patterns (MAMPs) with the help of pattern recognition receptors (PRRs). Studies have classified mannose-binding lectin (MBL) as one of the PRR molecules which belong to the C-type lectin family. The protective role of MBL lies in its ability to activate the complement system via the lectin pathway and there seems to be a direct link between the chicken’s health status and the MBL concentration in the serum. Several methods have been used to detect the presence, the level and the structure of MBL in chickens such as Enzyme-linked immunosorbent assay (ELISA), Polymerase Chain Reaction (PCR) among others. The concentration of MBL in the chicken ranges from 0.4 to 35 µg/mL and can be at peak levels at three to nine days at entry of pathogens. The variations observed are known to depend on the bacterial strains, breed and age of the chicken and possibly the feed manipulation strategies. However, when chicken MBL (cMBL) becomes deficient, it can result in malfunctioning of the innate immune system, which can predispose chickens to diseases. This article aimed to discuss the importance and components of mannose-binding lectin (MBL) in chickens, its mode of actions, and the different methods used to detect MBL. Therefore, more studies are recommended to explore the causes for low and high cMBL production in chicken breeds and the possible effect of feed manipulation strategies in enhancing cMBL production.

Aim: The study was conducted to determine the intensity of gastrointestinal parasite (GIP) infections and hematological parameters in South African communal indigenous goats in relation to anemia. Materials and Methods: A total of 288 goats were randomly sampled in areas representing four agro-ecological zones. Fecal and blood samples were collected from the rectum and jugular vein, respectively, of each animal. The number of eggs per gram (EPG) and oocysts per gram (OPG) of feces and the hematological parameters were determined using the modified McMaster technique and a BC-2800Vet® automatic hematology analyzer, respectively. Data were analyzed using the repeated measures techniques of Minitab 17, modeling the covariance structure of the observed data. Results: Based on EPG and OPG, goats in humid zone were significantly infected (p<0.05) with strongyles, Eimeria, Moniezia, and Trichuris spp. Hematological parameters of goats in arid and humid zone were lower (p<0.05) than those in semi-arid and dry sub-humid zone. GIP infection intensities and hematological parameters were higher (p<0.05) in young animals than in adult and suckling goats. GIP infection intensity was similar between goat sexes, while hematological parameters were higher (p<0.05) in females. Higher (p<0.05) infection intensities for strongyles (302.90 EPG) and Eimeria (216.09 EPG) were observed in winter compared to summer (strongyles: 302.90, Eimeria: 216.09 EPG). Higher (p<0.05) values for the hematological parameters were observed during summer compared to that in winter. Conclusion: GIP infection intensity in the winter could be associated with hypochromic and normocytic anemia which likely to affects suckling goats while in the summer could be associated with normochromic and normocytic anemia which likely to affect young goats.

Agree Nephawe and Bohani Mtileni. This open access article is distributed under a Creative Commons Attribution (CC-BY) 3.0 license.

The demand to conserve indigenous species through the cryo-gene bank is increasing. Spermatozoa remain sensitive to cryopreservation damages especially that of avian species thus limiting the use of reproductive biotechnologies such as artificial insemination in the conservation programs. Long-chain polyunsaturated fatty acid (LCPUFAs), specifically omega n-3, expanded a research interest to improve animal reproductive efficiency through improving spermatozoa quality. This is driven by the fact that mammals cannot synthesize omega-3 de-novo because they lack delta-12 and delta-15 desaturase enzymes thus supplemented in the diet is mandatory. Delta-12 and delta-15 add a double bond at the 12th and 15th carbon-carbon bond from the methyl end of fatty acids, lengthening the chain to 22 carbon molecules. Fish oil is a pioneer source of omega n-3 and n-6 fatty acids. However, there is a report that numerous fisheries are over-exploited and could collapse. Furthermore, processing techniques used for processing by-products could complement alterations of the amino acid profile and reduce protein retrieval. Alternatively, flaxseed oil contains ±52–58% of total fatty acids and lignans in the form of α-linolenic and linoleic acid. Alpha-linolenic acid (ALA,18:3n-3) is enzymatically broken-down de-novo by delta-6 desaturase and lengthened into a long-chain carbon molecule such as eicosapentaenoic acid (C20:5n-3). Nevertheless, controversial findings following the enrichment of diet with flaxseed oil have been reported. Therefore, this paper is aimed to postulate the role of flaxseed oil as an alternative source of omega n-3 and n-6 fatty acids to improve semen quality and quantity from livestock animals. These include the interaction between docosahexaenoic acid (DHA) and spermatogenesis, the interaction between docosahexaenoic acid (DHA) and testicular cells, and the effect of flaxseed oil on semen quality. It additionally assesses the antioxidants to balance the level of PUFAs in the semen.

South African indigenous breeds’ population is decreasing at a time when their genetic material is mandatory due to the rising climate change and global warming. South African indigenous sheep breeds include Namaqua Afrikaner, Zulu, BaPedi, and Damara sheep. These breeds are the most preferred breeds by rural farmers in South Africa due to their adaptability, low feed, and veterinary requirements. However, since they are characterized by small body sizes, farmers tend to crossbreed them with exotic breeds. An early survey conducted in Kwa-Zulu Natal revealed a 7.5% decline in Zulu sheep between 2008–2011. It has recently been observed that the population left is genotypically mixed with exotic genetic material due to uncontrolled breeding techniques that rural farmers apply. Therefore, the aim of this review is to address the present status, difficulties, and conservation approaches applied to save these breeds. However, this review will be limited to the current extinction status as it appears in the Food and Agriculture Organization (FAO) system, data from recent studies, difficulties limiting the conservation success of these breeds, and the current conservation approaches in use to conserve these breeds.