The R/V Oceanus completed a 9,789 km, 28 day passage from Woods Hole, Massachusetts, in the Atlantic Ocean, through the Panama Canal to Yaquina Bay, Oregon, in the Pacific Ocean on 21 February 2012. The Oceanus had previously operated in the Mediterranean Sea and Atlantic Ocean (including the Caribbean Sea). We document the sequential acquisition of the barnacles Balanus trigonus and Amphibalanus venustus and the oyster Ostrea equestris on the Oceanus on its high and low latitude transoceanic, intra-oceanic, and interoceanic travels before she was surveyed in Yaquina Bay. The close correspondence between hull fouling accumulations and the detailed two year Oceanus working history reveals B. trigonus settlement occurred in every tropical port visited by the Oceanus, that some populations survived through two of three Woods Hole winters, and that some of these populations passed through the freshwater Panama Canal. These results suggest that marine hull-fouling species are continuously transported globally between most ports of call by most ship passages.
Permafrost, frozen ground cemented with ice, occupies about a quarter of the Earth’s hard surface and reaches up to 1000 metres depth. Due to constant subzero temperatures, permafrost represents a unique record of past epochs, whenever it comes to accumulated methane, oxygen isotope ratio or stored mummies of animals. Permafrost is also a unique environment where cryptobiotic stages of different microorganisms are trapped and stored alive for up to hundreds of thousands of years. Several protist strains and two giant protist viruses isolated from permafrost cores have been already described.In this paper, we describe a collection of 35 amoeboid protist strains isolated from the samples of Holocene and Pleistocene permanently frozen sediments. These samples are stored at −18°C in the Soil Cryology Lab, Pushchino, Russia and may be used for further studies and isolation attempts. The collection strains are maintained in liquid media and may be available upon request. The paper also presents a dataset which consists of a table describing the samples and their properties (termed "Sampling events") and a table describing the isolated strains (termed "Occurrences"). The dataset is publicly available through the GBIF portal.
Acanthamoeba castellanii species complex (genotype T4) comprises of more than ten species with unclear synonymy. Its molecular phylogeny has several conflicts with published morphological data. In this paper, we analyze morphometric traits and temperature preferences in six new strains belonging to A. castellanii complex isolated from Arctic permafrost in the framework of molecular phylogeny. This integrative approach allows us to cross-link genotypic and phenotypic variability and identify species-level boundaries inside the complex. We also analyze previously known and newly found discrepancies between the nuclear and mitochondrial gene-based phylogenies. We hypothesize that one reason for these discrepancies may be the intragenomic polymorphism of ribosomal RNA genes.
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