We present a general framework to predict the excess solubility of small molecular solids (such as pharmaceutical solids) in binary solvents via molecular simulation free energy calculations at infinite dilution with conventional molecular models. The present study used molecular dynamics with the General AMBER Force Field to predict the excess solubility of acetanilide, acetaminophen, phenacetin, benzocaine, and caffeine in binary water/ethanol solvents. The simulations are able to predict the existence of solubility enhancement and the results are in good agreement with available experimental data. The accuracy of the predictions in addition to the generality of the method suggests that molecular simulations may be a valuable design tool for solvent selection in drug development processes.
We have studied the conformational changes of two novel amphiphilic homopolymers in water and toluene relevant to delivery applications using molecular dynamics simulations supplemented with enhanced sampling techniques. The individual homopolymer repeating units are amphiphilic with a hydrophobic dodecyl chain and a hydrophilic tetra(ethylene glycol) chain attached via ether linkages to each repeating unit of the polymer backbone. Two polymer topologies were examined: one cyclic and one an exact linear analog. Here we show that these polymers exhibit highly dynamic conformations with the side arm orientations driven by the solvent polarity. In water these polymers exhibit a compact conformation with the hydrophobic arms retracted toward the backbone core, whereas in toluene the hydrophobic arms extended into the solvent. Different from the hydrophobic arms, the hydrophilic ethylene glycol chain orientations and backbone conformations are largely unperturbed by the solvent polarity. Probing the polymer microenvironment in different solvents to examine solute uptake supports the hypothesis that these polymers can selectively encapsulate/release guest molecules depending on the solvent polarity, highlighting the potential of these polymers as drug delivery vehicles.
Chlorophyll a (Chl-a) is at the heart of solar energy capture and conversion in plants. Because of this, Chl-a has been the subject of innumerable studies. Recently, we have been able to use quantum mechanical methods to calculate the vibrational properties of neutral and oxidized Chl-a in the gas phase [Wang, R.; Parameswaran, S.; Hastings, G. Vib. Spectrosc. 2007, 44, 357-368]. The calculated vibrational properties do not agree with experiment, however. One factor ignored in our calculations was how solvents could impact the vibrational properties. Here we calculate the vibrational properties of Chl-a and Chl-a+ in several solvents that span a wide range of dielectric constant. The calculated and experimental (Chl-a+-Chl-a) infrared difference spectra now show a remarkable similarity. However, the composition of the calculated vibrational modes are very different from that suggested from experiment. We therefore use our calculated data to make new suggestions as to the origin of the bands in experimental (Chl-a+-Chl-a) FTIR difference spectra. We indicate why bands in experimental spectra may have been misassigned. We also point to other experimental data that support our new band assignments. Assignment of bands in (Chl-a+-Chl-a) FTIR difference spectra were first made nearly 20 years ago. These assignments have formed the basis for evaluating all "cation minus neutral" FTIR difference spectra obtained for all photosynthetic systems since then. All of these experimental FTIR difference spectra should be re-examined in light of our new assignments.
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