In biological modelling of the coastal phytoplankton dynamics, the light attenuation coefficient is often expressed as a function of the concentrations of chlorophyll and mineral suspended particulate matter (SPM). In order to estimate the relationship between these parameters over the continental shelf of the northern Bay of Biscay, a set of in situ data has been gathered for the period 1998-2003 when SeaWiFS imagery is available. These data comprise surface measurements of the concentrations of total SPM, chlorophyll, and irradiance profiles from which is derived the attenuation coefficient of the photosynthetically available radiation, K PAR. The performance of the IFREMER look-up table used to retrieve the chlorophyll concentration from the SeaWiFS radiance is evaluated on this new set of data. The quality of the estimated chlorophyll concentration is assessed from a comparison of the variograms of the in situ and satellite-derived chlorophyll concentrations. Once the chlorophyll concentration is determined, the non living SPM, which is defined as the SPM not related to the dead or alive endogenous phytoplankton, is estimated from the radiance at 555 nm by inverting a semi-analytic model. This method provides realistic estimations of concentrations of chlorophyll and SPM over the continental shelf all over the year. Finally, a relationship, based on non living SPM and chlorophyll, is proposed to estimate K PAR on the continental shelf of the Bay of Biscay. The same formula is applied to non living SPM and chlorophyll concentrations, observed in situ or derived from SeaWiFS radiance.

The increased use of backscatter measurements in time series for environmental monitoring necessitates the comparability of individual results. With the current lack of pre-calibrated multibeam echosounder systems for absolute backscatter measurement, a pragmatic solution is the use of natural reference areas for ensuring regular assessment of the backscatter measurement repeatability. This method mainly relies on the assumption of a sufficiently stable reference area regarding its backscatter signature. The aptitude of a natural area to provide a stable and uniform backscatter response must be carefully considered and demonstrated by a sufficiently long time-series of measurements. Furthermore, this approach requires a strict control of the acquisition and processing parameters. If all these conditions are met, stability check and relative calibration of a system are possible by comparison with the averaged backscatter values for the area. Based on a common multibeam echosounder and sampling campaign completed by available bathymetric and backscatter time series, the suitability as a backscatter reference area of three different candidates was evaluated. Two among them, Carré Renard and Kwinte, prove to be excellent choices, while the third one, Western Solent, lacks sufficient data over time, but remains a valuable candidate. The case studies and the available backscatter data on these areas prove the applicability of this method. The expansion of the number of commonly used reference areas and the growth of the number of multibeam echosounder controlled thereon could greatly contribute to the further development of quantitative applications based on multibeam echosounder backscatter measurements.

The general trend in ecosystem modelling is to improve the spatial resolution by shifting from rough box-models to fine 3D models. Despite the continuous speeding-up of computing, 3D models involving numerous state variables may remain intractable, especially for parameter calibration, when processes with long half-life periods (i.e, from years to decades) are introduced, such as the behaviour of organic matter in sediment and population dynamics of benthic species. In these cases, a first approach can be provided by fast-running box-models, if they take into account the most crucial hydrodynamic properties of the system. In a macrotidal shelf sea such as the English Channel, the long-term horizontal transport can be summarized by the tidal residual circulation, and the vertical stratification can be sketched by a two-or three-layered integral model. This paper compares the results obtained in the English Channel area by the same biogeochemical equations of pelagic primary production, coupled to 1) a two-layered box-model 2) a three-layered box-model (i.e., with an intermediate cline layer between surface and bottom ones) and 3) a finegridded 3D model. Comparison is focused firstly on thermal stratification and summer dinoflagellate blooms in the northwestern Channel and secondly on the haline stratification and the sequence of blooms obtained in the eutrophicated Seine river plume. Comparison shows that box-models act as low-pass filters which reproduce correctly the weekly mean time-course, but greatly reduce the variance locally observed in a tide-oscillating plume region. As far as global characteristics are concerned, such as the annual primary production, or the percentage of variation in annual production after reducing the nutrient loadings, the box and 3D models gave very similar results. This conclusion reinforces the usefulness of using box-models as a first approach in long-term processes, for which a long transient phase is expected before reaching the annual periodic solution.

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A pair of self-contained acoustic Doppler current profilers (SC-ADCPs) operating with different frequencies were moored on a muddy sea bottom at about 20 m depth in the Bay of Vilaine off the French Atlantic coast. With their acoustic beams oriented upwards, the SC-ADCPs ensonified most of the water column. The results of several months of in situ recorded echo intensity data spanning 2 years (2003 to 2004) from the dual-frequency ADCPs are presented in this paper. The aim was to estimate suspended particle mass concentration and mean size. A concentration index CI is proposed for the estimation of particle concentration. Based on theory the CI-unlike the volume backscatter strength-does not depend on particle size. Compared with in situ optical data, the CI shows reasonable precision but not increased with respect to that of the highest-frequency backscatter strength. Concerning the mean particle size, despite a lack of quantitative validation with optical particle-size measurements, the method yielded a qualitative discrimination of mineral (small) and organic (large) particles. This supports the potential of dual-frequency ADCPs to quantitatively determine particle size. A cross-calibration of the transducers of each ADCP shows that a specific component of the precision of the backscatter strength measured by ADCP depends on the acoustic frequency, the cell thickness and the ensemble integration time. Based on these results, the use of two ADCPs operating with distinctly different frequencies (two octaves apart) or a single dual-frequency ADCP is recommended.

Different scales of hydrological and biological patterns of the Bay of Biscay are assessed using space-borne and airborne optical remote sensing data, field measurements and a 3-dimensional biophysical model. If field measurements provide accurate values on the vertical dimension, ocean colour data offer frequent observations of surface biological patterns at various scales of major importance for the validation of ecosystem modelling. Although the hydrobiological model of the continental margin reproduces the main seasonal variability of surface biomass, the optical remote sensing data have helped to identify low grid resolution, input inaccuracies and neglect of swell-induced erosion mechanism as model limitations in shallow waters. Airborne remote sensing is used to show that satellite data and field measurements are unsuitable for comparison in the extreme case of phytoplankton blooms in patches of a few hundred metres. Vertically, the satellite observation is consistent with near surface in situ measurements as the sub-surface chlorophyll maximum usually encountered in summer is not detected by optical remote sensing. A mean error (dC/C) of 50.5% of the chlorophyll-a estimate in turbid waters using the SeaWiFS-OC5 algorithm allows the quantitative use of ocean colour data by the coastal oceanographic community.

Abstract. -In order to study the occurrence of Gymnodinium mikimotoï bloom on the French Atlantic coast, a three-dimensional model of primary production was set up. The biological model was coupled to a hydrodynamic model previously developed at If remer, by the intermediary of transport, diffusion and heat fluxes. The cycles of three limiting el¬ ements for the phytoplankton growth were modelised: nitrogen, phosphorus and silicon. The

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