We explore the ways in which primordial magnetic fields influence the thermal and ionization history of the post‐recombination Universe. After recombination, the Universe becomes mostly neutral, resulting also in a sharp drop in the radiative viscosity. Primordial magnetic fields can then dissipate their energy into the intergalactic medium via ambipolar diffusion and, for small enough scales, by generating decaying magnetohydrodynamics turbulence. These processes can significantly modify the thermal and ionization history of the post‐recombination Universe. We show that the dissipation effects of magnetic fields, which redshifts to a present value B0= 3 × 10−9 G smoothed on the magnetic Jeans scale and below, can give rise to Thomson scattering optical depths τ≳ 0.1, although not in the range of redshifts needed to explain the recent Wilkinson Microwave Anisotropy Probe (WMAP) polarization observations. We also study the possibility that primordial fields could induce the formation of subgalactic structures for z≳ 15. We show that early structure formation induced by nanoGauss magnetic fields is potentially capable of producing the early reionization implied by the WMAP data. Future cosmic microwave background observations will be very useful to probe the modified ionization histories produced by primordial magnetic field evolution and constrain their strength.

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The Murchison Widefield Array (MWA) has collected hundreds of hours of Epoch of Reionization (EoR) data and now faces the challenge of overcoming foreground and systematic contamination to reduce the data to a cosmological measurement. We introduce several novel analysis techniques, such as cable reflection calibration, hyper-resolution gridding kernels, diffuse foreground model subtraction, and quality control methods. Each change to the analysis pipeline is tested against a two-dimensional power spectrum figure of merit to demonstrate improvement. We incorporate the new techniques into a deep integration of 32 hoursof MWA data. This data set is used to place a systematic-limited upper limit on the cosmological power spectrum of  D2.7 10 2 4 mK 2 at k = 0.27 h Mpc −1 and z = 7.1, consistent with other published limits, and a modest improvement (factor of 1.4) over previous MWA results. From this deep analysis, we have identified a list of improvements to be made to our EoR data analysis strategies. These improvements will be implemented in the future and detailed in upcoming publications.

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Measurements of 21 cm Epoch of Reionization (EoR) structure are subject to systematics originating from both the analysis and the observation conditions. Using 2013 data from the Murchison Widefield Array (MWA), we show the importance of mitigating both sources of contamination. A direct comparison between results from Beardsley et al. and our updated analysis demonstrates new precision techniques, lowering analysis systematics by a factor of 2.8 in power. We then further lower systematics by excising observations contaminated by ultra-faint RFI, reducing by an additional factor of 3.8 in power for the zenith pointing. With this enhanced analysis precision and newly developed RFI mitigation, we calculate a noise-dominated upper limit on the EoR structure of Δ2 ≤ 3.9 × 103 mK2 at k = 0.20 h Mpc−1 and z = 7 using 21 hr of data, improving previous MWA limits by almost an order of magnitude.