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Increases in relative sea level are fragmenting the emergent vegetation of Louisiana's coastal marshes. Nekton abundance is likely impacted by salinity and whether emergent vegetation is replaced by submerged aquatic vegetation (SAV) or open water. To assess these effects, we sampled nekton densities along a salinity gradient (categorized as freshwater, intermediate, and brackish marsh) in fragmented and non-fragmented areas. Total nekton density increased strongly with SAV in brackish marsh but only weakly in freshwater marsh (F 2,238 =10.03, p< 0.0001). Freshwater and intermediate marshes had higher nekton densities when fragmented than when nonfragmented; this relationship was reversed in brackish marsh (F 2,238 =8.89, p=0.0002). Fragmentation, SAV, and salinity interacted to affect the densities of Gambusia affinis, Poecilia latipinna, Cyprinodon variegates, and Lucania parva. Our results suggest that the presence of both emergent vegetation and SAV was necessary for maintaining high nekton densities, with this combination being especially important in brackish marshes.

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Coastal habitats are susceptible to changes in the environment associated with alterations in salinity. A field study was conducted on natural populations of the sailfin molly Poecilia latipinna, the western mosquitofish Gambusia affinis and the least killifish Heterandria formosa collected from coastal marsh sites along a salinity gradient, to investigate the influence of salinity on body condition and reproductive life history traits. In brackish marsh sites male P. latipinna had the best body conditions, while females had similar body conditions across all 3 marsh types. Female P. latipinna had greater reproductive allotment and fecundity in brackish marshes, where this fish was most abundant. Specimens of G. affinis collected from fresh marsh sites had less favorable body condition, and females had lower reproductive allotment and fecundity than those collected from higher salinities. While G. affinis was more abundant in freshwater marshes than in higher salinity marshes, this higher abundance did not correspond with a better body condition or higher reproductive effort, suggesting that G. affinis may be stressed in freshwater. There was no difference in the conditions between (both male and female) H. formosa from fresh and intermediate marshes. Female H. formosa from fresh marshes had a similar reproductive allotment and lower fecundity than those from intermediate marshes. The 3 species exhibited different life history patterns along the salinity gradient, and some of these patterns conflicted with expectations based on species abundances. When assessing habitat quality along an environmental gradient, measures of abundance should be accompanied by more sensitive indicators of environmental stress.

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Saltwater intrusion into estuaries creates stressful conditions for nektonic species. Previous studies have shown that Gambusia affinis populations with exposure to saline environments develop genetic adaptations for increased survival during salinity stress. Here, we evaluate the genetic structure of G. affinis populations, previously shown to have adaptations for increased salinity tolerance, and determine the impact of selection and gene flow on structure of these populations. We found that gene flow was higher between populations experiencing different salinity regimes within an estuary than between similar marsh types in different estuaries, suggesting the development of saline-tolerant phenotypes due to local adaptation. There was limited evidence of genetic structure along a salinity gradient, and only some of the genetic variation among sites was correlated with salinity. Our results suggest limited structure, combined with selection to saltwater intrusion, results in phenotypic divergence in spite of a lack of physical barriers to gene flow.

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