Over the past decades, many studies have been published on the extraction of non-invasive foetal electrocardiogram (NI-FECG) from abdominal recordings. Most of these contributions claim to obtain excellent results in detecting foetal QRS (FQRS) complexes in terms of location. A small subset of authors have investigated the extraction of morphological features from the NI-FECG. However, due to the shortage of available public databases, the large variety of performance measures employed and the lack of open-source reference algorithms, most contributions cannot be meaningfully assessed. This article attempts to address these issues by presenting a standardised methodology for stress testing NI-FECG algorithms, including absolute data, as well as extraction and evaluation routines. To that end, a large database of realistic artificial signals was created, totaling 145.8 h of multichannel data and over one million FQRS complexes. An important characteristic of this dataset is the inclusion of several non-stationary events (e.g. foetal movements, uterine contractions and heart rate fluctuations) that are critical for evaluating extraction routines. To demonstrate our testing methodology, three classes of NI-FECG extraction algorithms were evaluated: blind source separation (BSS), template subtraction (TS) and adaptive methods (AM). Experiments were conducted to benchmark the performance of eight NI-FECG extraction algorithms on the artificial database focusing on: FQRS detection and morphological analysis (foetal QT and T/QRS ratio). The overall median FQRS detection accuracies (i.e. considering all non-stationary events) for the best performing methods in each group were 99.9% for BSS, 97.9% for AM and 96.0% for TS. Both FQRS detections and morphological parameters were shown to heavily depend on the extraction techniques and signal-to-noise ratio. Particularly, it is shown that their evaluation in the source domain, obtained after using a BSS technique, should be avoided. Data, extraction algorithms and evaluation routines were released as part of the fecgsyn toolbox on Physionet under an GNU GPL open-source license. This contribution provides a standard framework for benchmarking and regulatory testing of NI-FECG extraction algorithms.
This study tackles the ECG classification problem by means of a methodology, which is able to enhance classification performance while simultaneously reducing the computational resources, making it specially adequate for its application in the improvement of ambulatory settings. For this purpose, the sequential forward floating search (SFFS) algorithm is applied with a new criterion function index based on linear discriminants. This criterion has been devised specifically to be a quality indicator in ECG arrhythmia classification. Based on this measure, a comprehensive feature set is analyzed with the SFFS algorithm, and the most suitable subset returned is additionally evaluated with a multilayer perceptron (MLP) to assess the robustness of the model. Aiming at obtaining meaningful estimates of the real-world performance and facilitating comparison with similar studies, the present contribution follows the Association for the Advancement of Medical Instrumentation standard EC57:1998 and the same interpatient division scheme used in several previous studies. Results show that by applying the proposed methods, the performance obtained in similar studies under the same constraints can be exceeded, while keeping the requirements suitable for ambulatory monitoring
The fetal ECG derived from abdominal leads provides an alternative to standard means of fetal monitoring. Furthermore, it permits long-term and ambulant recordings, which expands the range diagnostic possibilities for evaluating the fetal health state. However, due to the temporal and spectral overlap of maternal and fetal signals, the usage of abdominal leads imposes the need for elaborated signal processing routines.In this work a modular combination of processing techniques is presented. Its core consists of two maternal ECG estimation techniques, namely the extended Kalman smoother (EKS) and template adaption (TA) in combination with an innovative detection algorithm. Our detection method employs principles of evolutionary computing to detect fetal peaks by considering the periodicity and morphological characteristics of the fetal signal. In a postprocessing phase, single channel detections are combined by means of kernel density estimation and heart rate correction.The described methodology was presented during the Computing in Cardiology Challenge 2013. The entry was the winner of the closed-source events with average scores for events 4/5 with 15.1/3.32 (TA) and 69.5/4.58 (EKS) on training set-A and 20.4/4.57 (TA) and 219/7.69 (EKS) on test set-B, respectively. Using our own clinical data (24 subjects each 20 min recordings) and statistical measures beyond the Challenge's scoring system, we further validated the proposed method. For our clinical data we obtained an average detection rate of 82.8% (TA) and 83.4% (EKS). The achieved results show that the proposed methods are able produce reliable fetal heart rate estimates from a restricted number of abdominal leads.
Online review sites and opinion forums contain a wealth of information regarding user preferences and experiences over multiple product domains. This information can be leveraged to obtain valuable insights using data mining approaches such as sentiment analysis. In this work we examine online user reviews within the pharmaceutical field. Online user reviews in this domain contain information related to multiple aspects such as effectiveness of drugs and side effects, which make automatic analysis very interesting but also challenging. However, analyzing sentiments concerning the various aspects of drug reviews can provide valuable insights, help with decision making and improve monitoring public health by revealing collective experience. In this preliminary work we perform multiple tasks over drug reviews with data obtained by crawling online pharmaceutical review sites. We first perform sentiment analysis to predict the sentiments concerning overall satisfaction, side effects and effectiveness of user reviews on specific drugs. To meet the challenge of lacking annotated data we further investigate the transferability of trained classification models among domains, i.e. conditions, and data sources. In this work we show that transfer learning approaches can be used to exploit similarities across domains and is a promising approach for cross-domain sentiment analysis.
Non-Invasive foetal electrocardiography (NI-FECG) represents an alternative foetal monitoring technique to traditional Doppler ultrasound approaches, that is non-invasive and has the potential to provide additional clinical information. However, despite the significant advances in the field of adult ECG signal processing over the past decades, the analysis of NI-FECG remains challenging and largely unexplored. This is mainly due to the relatively low signal-to-noise ratio of the FECG compared to the maternal ECG, which overlaps in both time and frequency. This article is intended to be used by researchers as a practical guide to NI-FECG signal processing, in the context of the above issues. It reviews recent advances in NI-FECG research including: publicly available databases, NI-FECG extraction techniques for foetal heart rate evaluation and morphological analysis, NI-FECG simulators and the methodology and statistics for assessing the performance of the extraction algorithms. Reference to the most recent work is given, recent findings are highlighted in the form of intermediate summaries, references to open source code and publicly available databases are provided and promising directions for future research are motivated. In particular we emphasise the need and specifications for building a new open reference database of NI-FECG signals, and the need for new algorithms to be benchmarked on the same database, employing the same evaluation statistics. Finally we motivate the need for research in NI-FECG to address morphological analysis, since this represent one of the most promising avenues for this foetal monitoring modality.
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