Dilated cardiomyopathy (DCM) is an important cause of heart failure and the leading indication for heart transplantation. Many rare genetic variants have been associated with DCM, but common variant studies of the disease have yielded few associated loci. As structural changes in the heart are a defining feature of DCM, we report a genome-wide association study of cardiac magnetic resonance imaging (MRI)-derived left ventricular measurements in 36,041 UK Biobank participants, with replication in 2184 participants from the Multi-Ethnic Study of Atherosclerosis. We identify 45 previously unreported loci associated with cardiac structure and function, many near well-established genes for Mendelian cardiomyopathies. A polygenic score of MRI-derived left ventricular end systolic volume strongly associates with incident DCM in the general population. Even among carriers of TTN truncating mutations, this polygenic score influences the size and function of the human heart. These results further implicate common genetic polymorphisms in the pathogenesis of DCM.

Enlargement or aneurysm of the aorta predisposes to dissection, an important cause of sudden death. We trained a deep learning model to evaluate the dimensions of the ascending and descending thoracic aorta in 4.6 million cardiac magnetic resonance images from the UK Biobank. We then conducted genome-wide association studies in 39,688 individuals, identifying 82 loci associated with ascending and 47 with descending thoracic aortic diameter, of which 14 loci overlapped. Transcriptome-wide analyses, rare-variant burden tests, and human aortic single nucleus RNA sequencing prioritized genes including SVIL , which was strongly associated with descending aortic diameter. A polygenic score for ascending aortic diameter was associated with thoracic aortic aneurysm in 385,621 UK Biobank participants (HR = 1.43 per s.d.; CI 1.32-1.54; P = 3.3 × 10 −20 ). Our results illustrate the potential for rapidly defining quantitative traits with deep learning, an approach that can be broadly applied to biomedical images.

Background: Artificial intelligence (AI)-enabled analysis of 12-lead electrocardiograms (ECGs) may facilitate efficient estimation of incident atrial fibrillation (AF) risk. However, it remains unclear whether AI provides meaningful and generalizable improvement in predictive accuracy beyond clinical risk factors for AF. Methods: We trained a convolutional neural network ("ECG-AI") to infer 5-year incident AF risk using 12-lead ECGs in patients receiving longitudinal primary care at Massachusetts General Hospital (MGH). We then fit three Cox proportional hazards models, each composed of: a) ECG-AI 5-year AF probability, b) the Cohorts for Heart and Aging in Genomic Epidemiology AF (CHARGE-AF) clinical risk score, and c) terms for both ECG-AI and CHARGE-AF ("CH-AI"). We assessed model performance by calculating discrimination (area under the receiver operating characteristic curve, AUROC) and calibration in an internal test set and two external test sets (Brigham and Women's Hospital and UK Biobank). Models were recalibrated to estimate 2-year AF risk in the UK Biobank given limited available follow-up. We used saliency mapping to identify ECG features most influential on ECG-AI risk predictions and assessed correlation between ECG-AI and CHARGE-AF linear predictors. Results: The training set comprised 45,770 individuals (age 55±17 years, 53% women, 2,171 AF events), and the test sets comprised 83,162 individuals (age 59±13 years, 56% women, 2,424 AF events). AUROC was comparable using CHARGE-AF (MGH 0.802, 95% CI 0.767-0.836; BWH 0.752, 95% CI 0.741-0.763; UK Biobank 0.732, 95% CI 0.704-0.759) and ECG-AI (MGH 0.823, 95% CI 0.790-0.856; BWH 0.747, 95% CI 0.736-0.759; UK Biobank 0.705, 95% CI 0.673-0.737). AUROC was highest using CH-AI: MGH 0.838, 95% CI 0.807-0.869; BWH 0.777, 95% CI 0.766-0.788; UK Biobank 0.746, 95% CI 0.716-0.776). Calibration error was low using ECG-AI (MGH 0.0212; BWH 0.0129; UK Biobank 0.0035) and CH-AI (MGH 0.012; BWH 0.0108; UK Biobank 0.0001). In saliency analyses, the ECG P-wave had the greatest influence on AI model predictions. ECG-AI and CHARGE-AF linear predictors were correlated (Pearson r MGH 0.61, BWH 0.66, UK Biobank 0.41). Conclusions: AI-based analysis of 12-lead ECGs has similar predictive utility to a clinical risk factor model for incident AF and both approaches are complementary. ECG-AI may enable efficient quantification of future AF risk.

Psychedelics probably alter states of consciousness by disrupting how the higher association cortex governs bottom-up sensory signals. Individual hallucinogenic drugs are usually studied in participants in controlled laboratory settings. Here, we have explored word usage in 6850 free-form testimonials about 27 drugs through the prism of 40 neurotransmitter receptor subtypes, which were then mapped to three-dimensional coordinates in the brain via their gene transcription levels from invasive tissue probes. Despite high interindividual variability, our pattern-learning approach delineated how drug-induced changes of conscious awareness are linked to cortex-wide anatomical distributions of receptor density proxies. Each discovered receptor-experience factor spanned between a higher-level association pole and a sensory input pole, which may relate to the previously reported collapse of hierarchical order among large-scale networks. Coanalyzing many psychoactive molecules and thousands of natural language descriptions of drug experiences, our analytical framework finds the underlying semantic structure and maps it directly to the brain.